Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2335g00044 ATGGGTGGTGAACCAAGGAAGAAACCGAAGCCCGCGCAGCTGAATCCCAACTGGACTCAACTCCAACAAAAGCTCAAAATTCGTGCCTCTGATGCTTCAAGACCCTTCAAAAACTCAGAAACTGAGGCCCCAAACTCAGTACTGGGGAAGCGGAAAGAGAGGGAAGATGCAGAGTCCAGTGATTCTCAGATTAATCCTCTTACCCCTGTAAATGATGATTCCAGTCTGACCGATGCAGTAGCCATGGACTGTGAAATGGTTGGTGTTGGTCAAGGAAACAGAAGTGCTCTTGGAAGAGTAACCCTGGTTAATAGGTGGGGAAATGTTATTTATGATGAATTTGTTAGACCAGTGGAGCGCGTTGTTGACTTCCGCACCAAAATTAGTGGCATAAGATCTCGGGACTTAAGAAAAGCAAAGGATTTTTGGGCGGTTCAGAAGAAAGTGGCAGAGTTAATCAAAGGCAGGGTCCTTGTGGGACATGCCCTGCACAATGATCTTAAGGCGTTATTATTAAGTCATCCCAAGAAGGATATTCGAGATACCTCTGAGTACCAACCATTTCTAAAATCACGTAGCAGAAGAGCACTTCGACATCTTGCTGCTGAACTTCTGGGTGCTAAGATCCAATCTGGGGAGCACTGTCCTATAGAAGATGCTCGTGCTGCTATGCTGCTTTATCAAAGGAATAGAAAAGAATGGGAGAGGAGTGTAAAAGATCAATTTCGACTTAAACAGAAGCAGAAAAAACGGAGGCCGAAGAAGAAGCAAAAGAAGGAAGTTTCTCCAGATGGGAATGCCTCGGGAGATGCATCATAG 819 0.4518 MGGEPRKKPKPAQLNPNWTQLQQKLKIRASDASRPFKNSETEAPNSVLGKRKEREDAESSDSQINPLTPVNDDSSLTDAVAMDCEMVGVGQGNRSALGRVTLVNRWGNVIYDEFVRPVERVVDFRTKISGIRSRDLRKAKDFWAVQKKVAELIKGRVLVGHALHNDLKALLLSHPKKDIRDTSEYQPFLKSRSRRALRHLAAELLGAKIQSGEHCPIEDARAAMLLYQRNRKEWERSVKDQFRLKQKQKKRRPKKKQKKEVSPDGNASGDAS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2335g00044 272 SUPERFAMILY Ribonuclease H-like 79 228 IPR012337 -
Pral2335g00044 272 MobiDBLite consensus disorder prediction 1 20 - -
Pral2335g00044 272 Pfam Exonuclease 80 227 IPR013520 -
Pral2335g00044 272 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 33 244 IPR047021 GO:0004527
Pral2335g00044 272 MobiDBLite consensus disorder prediction 46 60 - -
Pral2335g00044 272 SMART exoiiiendus 78 236 IPR013520 -
Pral2335g00044 272 MobiDBLite consensus disorder prediction 26 72 - -
Pral2335g00044 272 CDD REX4_like 80 228 IPR037431 GO:0006364|GO:0008408
Pral2335g00044 272 FunFam Interferon-stimulated exonuclease gene 20 75 246 - -
Pral2335g00044 272 Gene3D - 74 254 IPR036397 GO:0003676
Pral2335g00044 272 MobiDBLite consensus disorder prediction 243 257 - -
Pral2335g00044 272 MobiDBLite consensus disorder prediction 237 272 - -
Pral2335g00044 272 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2335g00044 Pral-Chr2335 239235 243994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2335g00044 79 233 C2H2 Transcription Factor Family AT3G27970 35.673 7.33e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2335g00044 K18327 - gmx:100819122 394.045