Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2335g00031 ATGGATTGTTACTTCCGTGTCGATAACGGTGATGCCCATCTGCCTCCTGGGTTTCGCTTCCACCCAACTGATGAGGAGCTCATTACTTTTTACCTCCTCAAGAAGGTTCTTGACAACACCTTCACAGGAAGAGCCATTGCTGAAGTTGATCTTAACAAGTGTGAGCCGTGGGAGCTTCCTGAGAAGGCGAAGATGGGTGAGAAAGAGTGGTACTTCTTCAGCCTCCGAGACCGAAAGTACCCAACTGGCCTGCGCACTAATAGGGCTACAGAAGCTGGATACTGGAAGGCCACTGAAGACAGGGAGATTTATAGCTCCAAAACTTGCTGTCTCGTGGGCATGAAGAAGACTCTGGTTTTCTACCGAGGTAGGGCTCCGAAAGGCGAAAAGAGCAACTGGGTCATGCATGAGTATCGTCTTGAAGGAAAATTTGCTTATCATTACCTTTCACGCAGCTCCAAGGATGAATGGGTCATCTCGCGTGTTTTCCAGAAGAGTCTCTCCTCTGGGAACGGCAGCTCCGCCGTGTCTTCCGCCAGTGGCTCCAAGAAGACTAACTCAAGAATGAGCTCTTCTGTTAACATGAGCCTCTACCCAGAACCCAGTTCTCCATCCTCCATTTACCTACCTCCTCTGCTTGACTCGTCTCCTTACGCCGCCGCCAACGACCGTGACAGCTGCTCCTATGACGGCAGCAGCACTACTCCGAGGGAGCACGTGTCCTGTTTCTCCACATTCTCTGCGTCTGCTGCCGCCAACAACCTCTCCAATGTTAGCTATGAACTTGCTCCTCCTCCTCCGCCGCCGCCGCCGCAGCAAATAGCTCTGGACCCCTTTGCTCGATTCCAGAACAACGTTGGTGTGCCTGCGTTTCCAAGCCTGAGGTCACTGCAGGAGAATCTTCAACTGCCTTTTCTACCTCCGGCCATAGCTCACGGTGGCTCCGGTGGAGACATGAACGGATGGGCCAAGCCGGAGGAGCAGACTGTAGCGGGTGGTGGTTCTGGCATGGCGCTGTGTCCGTCGGAGCTTGATTACGTGTGGGGTGGCTACTAG 1056 0.535 MDCYFRVDNGDAHLPPGFRFHPTDEELITFYLLKKVLDNTFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGXDREIYSSKTCCLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKSLSSGNGSSAVSSASGSKKTNSRMSSSVNMSLYPEPSSPSSIYLPPLLDSSPYAAANDRDSCSYDGSSTTPREHVSCFSTFSASAAANNLSNVSYELAPPPPPPPPQQIALDPFARFQNNVGVPAFPSLRSLQENLQLPFLPPAIAHGGSGGDMNGWAKPEEQTVAGGGSGMALCPSELDYVWGGY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2335g00031 352 SUPERFAMILY NAC domain 11 166 IPR036093 GO:0003677|GO:0006355
Pral2335g00031 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 224 - -
Pral2335g00031 352 MobiDBLite consensus disorder prediction 175 197 - -
Pral2335g00031 352 ProSiteProfiles NAC domain profile. 14 166 IPR003441 GO:0003677|GO:0006355
Pral2335g00031 352 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Pral2335g00031 352 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Pral2335g00031 352 FunFam NAC domain-containing protein 100-like 23 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2335g00031 Pral-Chr2335 181600 183773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2335g00031 1 349 NAC Transcription Factor Family AT5G53950 54.780 3.91e-117 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2335g00031 NAM 6.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2335g00031 - - qsa:O6P43_029134 441.81