Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2335g00026 ATGTCAATTGCTAGCATTCTACGGGACCTGTTGCATGCAATTGATTACTTACACAGTGAAGGAAAAATCCATAGAGACATTAAAGCTGCAAACATATTGTTGACTGAGAATGGTGATGTGAAGGTTGCAGATTTTGGTGTTTCTGCTCAGTTAACAAGGACTATGTCAAGGAGAAAGACGTTTGTAGGAACCCCATTCTGGATGGCACCGGAGGTCATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTTTAGGGATCACTGCAATTGAGATGGCGAAAGGGGAGCCTCCACTTGCTGATCTCCACCCAATTAGAGTTCTTTTTATCATACCCCGAGAGAATCCGCCCCAGCTGGATGAGCATTTTTCTCGTCCCATGAAAGAATTCGTGTCTCTGTGTCTAAAGAAAGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAGACATCGTTTTATTCGGAATGCAAGGAAAAGCCCTAAACTTTCGGAAAGAATAAGGGAGCGTCCAAAATACCAAATAAAGGAAGATCAATCAACACCTAAAAATGGCCCTCGAGGGGCAGGGGAGGGATCAGATACTATGAAGGTGGTAAGAGATACAAGGGGCGAAGAAGCTCAAAGACCTAGTGGTCAGGGTAAAAGCGTGAAGAATACTGGATGGGACTTCAGCATTGGCGGATCACAGGGTAGTGGAACCATTCGCAGTTCACGCCCACCTCATAGTCCAGTAACTGTTAATCAAAGAAAAACTTTAGAGAGTGGCCATCAAGGGGCATCTGCCTACAGAAGTAGATTTAATGAACCTTCGGAAACTACCGCTGGAAAAGATGTTAGGGCTTACCATGATGAGCGCAGGGGCAATCACCTGGATGATGATGAATTGTCTGGCAATGAATCAGGAACTGTTGTCATTCGATCTCCAAAAGGATCACATCAATCATTGAGTCGTGATCATAGCTCTCTGTCTAGCAGCAGTTTTTTCTCTCTTGAAGATGCTTCTACTGGCGGAACTATTGTCTTCCGTGGTCAGCATGATGACTCTGATTCGCAGACAGTGAGATCCAGACTGGTTCTTGAGGAGAGAACTTCAAATGCCTTTCTAGAGGATAGTGCTGCAAATCTTGCTGAGGCAAAAGCTGCCATGCAAGGAGGAAGGAAAGGGAATGCCCGGGATAGAGTTGTGGTGGGAAAGGTCAATAATGATTCACAAGAAGGCAGGAGAGACCAGGCAAGAGGCAGCCCCGATTATTCCAGATTATCTCGTGACTATGTGGATGTGCAAAAGGGAATTTCAAGATCTCGCCATCCTTGGGATGATGAAGAAAGTGCTAAAATAATGTCATCCTCTGTACCATTATCCAATTTGGTTATTCCTTCTTTGAAAGAGGCTGTTGCTAACGATCCAGAAGGCTCAATTGTAGAAGAAGTCGTCAATTCACTTGTCAGCATGGAGCGGGCAAATCCTAAATCCTCTGATCTTCTTCTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAATCTTCATTGAAGGAGCTTCAGGAGCTGGCCGGCGACTTATTCAGCAAGTCAGCTTCAGAAGAAACTCGAAACACAAGTGCGGCAACTGATGACCGGGGGAAGCAGCAGAGAAAGGATACTCACTCAAGCAATATAAGCCCACTAGCAAAATTTCTTCTCTCCAGATGGCAAGGTCAAGTCTCAAGGGATCTAAATCCAACTTAA 1740 0.4483 MSIASILRDLLHAIDYLHSEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTMSRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPIRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLSERIRERPKYQIKEDQSTPKNGPRGAGEGSDTMKVVRDTRGEEAQRPSGQGKSVKNTGWDFSIGGSQGSGTIRSSRPPHSPVTVNQRKTLESGHQGASAYRSRFNEPSETTAGKDVRAYHDERRGNHLDDDELSGNESGTVVIRSPKGSHQSLSRDHSSLSSSSFFSLEDASTGGTIVFRGQHDDSDSQTVRSRLVLEERTSNAFLEDSAANLAEAKAAMQGGRKGNARDRVVVGKVNNDSQEGRRDQARGSPDYSRLSRDYVDVQKGISRSRHPWDDEESAKIMSSSVPLSNLVIPSLKEAVANDPEGSIVEEVVNSLVSMERANPKSSDLLLKKLLQRLASSKESSLKELQELAGDLFSKSASEETRNTSAATDDRGKQQRKDTHSSNISPLAKFLLSRWQGQVSRDLNPT 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2335g00026 579 MobiDBLite consensus disorder prediction 274 300 - -
Pral2335g00026 579 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 2 528 - -
Pral2335g00026 579 MobiDBLite consensus disorder prediction 527 558 - -
Pral2335g00026 579 Pfam Protein kinase domain 3 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2335g00026 579 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2335g00026 579 MobiDBLite consensus disorder prediction 197 211 - -
Pral2335g00026 579 MobiDBLite consensus disorder prediction 304 332 - -
Pral2335g00026 579 Gene3D Transferase(Phosphotransferase) domain 1 1 190 - -
Pral2335g00026 579 MobiDBLite consensus disorder prediction 163 332 - -
Pral2335g00026 579 MobiDBLite consensus disorder prediction 215 273 - -
Pral2335g00026 579 MobiDBLite consensus disorder prediction 383 423 - -
Pral2335g00026 579 SMART serkin_6 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2335g00026 579 Coils Coil 501 521 - -
Pral2335g00026 579 SUPERFAMILY Protein kinase-like (PK-like) 3 219 IPR011009 -
Pral2335g00026 579 MobiDBLite consensus disorder prediction 537 551 - -
Pral2335g00026 579 MobiDBLite consensus disorder prediction 406 420 - -
Pral2335g00026 579 MobiDBLite consensus disorder prediction 163 180 - -
Pral2335g00026 579 FunFam Serine/threonine-protein kinase PAK 6 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2335g00026 Pral-Chr2335 146805 154016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2335g00026 2 576 MAP Kinase Kinase Kinase Kinase AT3G15220 58.953 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pral2335g00026 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2335g00026 K08838 - gmx:100786501 787.334