Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2335g00024 ATGGTGGACGCAGCAGGTTTGGCTGAGGCAGCAGGATCAAGATTCACTTCACTGGAGCTAATTGGACAGGGATCATTTGGGGACGTTTATAAAGGCTTTGACAAGGAGCTCAACAAAGAAGTTGCCATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAGATCGAAGATATTCAAAAGGAAATTTCTGTTCTGCAACAATGTCGATCTCCATATATTACTGAGTATTATGGTTCCTATCTCAACCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGACCTACTCCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTAGCATTCTACGGGACCTGTTGCATGCAATTGATTACTTACACAGTGAAGGAAAAATCCATAGAGACATTAAAGCTGCAAACATATTGTTGACTGAGAATGGTGATGTGAAGGTTGCAGATTTTGGTGTTTCTGCTCAGTTAACAAGGACTATGTCAAGGAGAAAGACGTTTGTAGGAACCCCATTCTGGATGGCACCGGAGGTCATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTTTAGGGATCACTGCAATTGAGATGGCGAAAGGGGAGCCTCCACTTGCTGATCTCCACCCAATTAGAGTTCTTTTTATCATACCCCGAGAGAATCCGCCCCAGCTGGATGAGCATTTTTCTCGTCCCATGAAAGAATTCGTGTCTCTGTGTCTAAAGAAAGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAGACATCGTTTTATTCGGAATGCAAGGAAAAGCCCTAAACTTTCGGAAAGAATAAGGGAGCGTCCAAAATACCAAATAAAGGAAGATCAATCAACACCTAAAAATGGCCCTCGAGGGGCAGGGGAGGGATCAGATACTATGAAGGTGGTAAGAGATACAAGGGGCGAAGAAGCTCAAAGACCTAGTGGTCAGGGTAAAAGCGTGAAGAATACTGGATGGGACTTCAGCATTGGCGGATCACAGGGTAGTGGAACCATTCGCAGTTCACGCCCACCTCATAGTCCAGTAACTGTTAATCAAAGAAAAACTTTAGAGAGTGGCCATCAAGGGGCATCTGCCTACAGAAGTAGATTTAATGAACCTTCGGAAACTACCGCTGGAAAAGATGTTAGGGCTTACCATGATGAGCGCAGGGGCAATCACCTGGATGATGATGAATTGTCTGGCAATGAATCAGGAACTGTTGTCATTCGATCTCCAAAAGGATCACATCAATCATTGAGTCGTGATCATAGCTCTCTGTCTAGCAGCAGTTTTTTCTCTCTTGAAGATGCTTCTACTGGCGGAACTATTGTCTTCCGTGGTCAGCATGATGACTCTGATTCGCAGACAGTGAGATCCAGACTGGTTCTTGAGGAGAGAACTTCAAATGCCTTTCTAGAGGATAGTGCTGCAAATCTTGCTGAGGCAAAAGCTGCCATGCAAGGAGGAAGGAAAGGGAATGCCCGGGATAGAGTTGTGGTGGGAAAGGTCAATAATGATTCACAAGAAGGCAGGAGAGACCAGGCAAGAGGCAGCCCCGATTATTCCAGATTATCTCGTGACTATGTGGATGTGCAAAAGGGAATTTCAAGATCTCGCCATCCTTGGGATGATGAAGAAAGTGCTAAAATAATGTCATCCTCTGTACCATTATCCAATTTGGTTATTCCTTCTTTGAAAGAGGCTGTTGCTAACGATCCAGAAGGCTCAATTGTAGAAGAAGTCGTCAATTCACTTGTCAGCATGGAGCGGGCAAATCCTAAATCCTCTGATCTTCTTCTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAATCTTCATTGAAGGAGCTTCAGGAGCTGGCCGGCGACTTATTCAGCAAGTCAGCTTCAGAAGAAACTCGAAACACAAGTGCGGCAACTGATGACCGGGGGAAGCAGCAGAGAAAGGATACTCACTCAAGCAATATAAGCCCACTAGCAAAATTTCTTCTCTCCAGATGGCAAGGTCAAGTCTCAAGGGATCTAAATCCAACTTAA 2070 0.444 MVDAAGLAEAAGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLQQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIASILRDLLHAIDYLHSEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTMSRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPIRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLSERIRERPKYQIKEDQSTPKNGPRGAGEGSDTMKVVRDTRGEEAQRPSGQGKSVKNTGWDFSIGGSQGSGTIRSSRPPHSPVTVNQRKTLESGHQGASAYRSRFNEPSETTAGKDVRAYHDERRGNHLDDDELSGNESGTVVIRSPKGSHQSLSRDHSSLSSSSFFSLEDASTGGTIVFRGQHDDSDSQTVRSRLVLEERTSNAFLEDSAANLAEAKAAMQGGRKGNARDRVVVGKVNNDSQEGRRDQARGSPDYSRLSRDYVDVQKGISRSRHPWDDEESAKIMSSSVPLSNLVIPSLKEAVANDPEGSIVEEVVNSLVSMERANPKSSDLLLKKLLQRLASSKESSLKELQELAGDLFSKSASEETRNTSAATDDRGKQQRKDTHSSNISPLAKFLLSRWQGQVSRDLNPT 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2335g00024 689 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2335g00024 689 MobiDBLite consensus disorder prediction 273 290 - -
Pral2335g00024 689 MobiDBLite consensus disorder prediction 493 533 - -
Pral2335g00024 689 MobiDBLite consensus disorder prediction 384 410 - -
Pral2335g00024 689 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2335g00024 689 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 637 - -
Pral2335g00024 689 MobiDBLite consensus disorder prediction 307 321 - -
Pral2335g00024 689 MobiDBLite consensus disorder prediction 414 442 - -
Pral2335g00024 689 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Pral2335g00024 689 SUPERFAMILY Protein kinase-like (PK-like) 12 327 IPR011009 -
Pral2335g00024 689 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2335g00024 689 MobiDBLite consensus disorder prediction 637 668 - -
Pral2335g00024 689 Coils Coil 41 68 - -
Pral2335g00024 689 Coils Coil 611 631 - -
Pral2335g00024 689 MobiDBLite consensus disorder prediction 516 530 - -
Pral2335g00024 689 CDD STKc_MST3_like 13 287 - -
Pral2335g00024 689 MobiDBLite consensus disorder prediction 273 442 - -
Pral2335g00024 689 MobiDBLite consensus disorder prediction 647 661 - -
Pral2335g00024 689 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pral2335g00024 689 MobiDBLite consensus disorder prediction 325 383 - -
Pral2335g00024 689 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2335g00024 Pral-Chr2335 144497 154016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2335g00024 1 686 MAP Kinase Kinase Kinase Kinase AT3G15220 63.158 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pral2335g00024 Pkinase 8.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2335g00024 K08838 - gmx:100786501 984.171