Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2335g00021 ATGGACAACAGAAGTATAGAGAGGAAACGACCATTCAATGAGAAGTCAAAGGATAAAATAATTGAAAAAGCAGAAGACGAAGAAGAGGAAGAAGATGAAAGGAAGAGTGTTACTGGTAGTCATGTAGAAGACGAAAAGAAGAAAGGGGTTGGTGGGATTAACAGAAGAGGATCAAGTGCCTGTCAAGCAGACAGGTGTGGAGCTAACTTGGCTGATGCAAAGAGATATCATCGCCGCCATAAAGTGTGTGAGTTTCATTCCAAGGCGCCTGTTGTGATCGTTGCGGGCCTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCACGACATAGGGGAATTTGATGAGGCAAAGAGGAGCTGCCGGAGGAGATTGGCGGAGCACAATGAGAGGCGGCGGAAAATTAATTCTGAAACTCACAATGATGGCGGCGAAAGTCATCATCAGAAACCAATGGAAGGGCGTTTCAGGCATGTTGATGACAGAGGAAGAAGAGTGAATTAG 504 0.4603 MDNRSIERKRPFNEKSKDKIIEKAEDEEEEEDERKSVTGSHVEDEKKKGVGGINRRGSSACQADRCGANLADAKRYHRRHKVCEFHSKAPVVIVAGLRQRFCQQCSRFHDIGEFDEAKRSCRRRLAEHNERRRKINSETHNDGGESHHQKPMEGRFRHVDDRGRRVN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2335g00021 167 ProSiteProfiles Zinc finger SBP-type profile. 58 135 IPR004333 GO:0003677
Pral2335g00021 167 Coils Coil 13 33 - -
Pral2335g00021 167 FunFam Squamosa promoter-binding-like protein 14 53 122 - -
Pral2335g00021 167 MobiDBLite consensus disorder prediction 1 61 - -
Pral2335g00021 167 MobiDBLite consensus disorder prediction 34 52 - -
Pral2335g00021 167 Pfam SBP domain 61 134 IPR004333 GO:0003677
Pral2335g00021 167 Gene3D - 57 122 IPR036893 GO:0003677|GO:0005634
Pral2335g00021 167 Coils Coil 118 138 - -
Pral2335g00021 167 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 46 137 IPR044817 GO:0003677
Pral2335g00021 167 MobiDBLite consensus disorder prediction 1 23 - -
Pral2335g00021 167 MobiDBLite consensus disorder prediction 125 167 - -
Pral2335g00021 167 SUPERFAMILY SBT domain 60 138 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2335g00021 Pral-Chr2335 114581 115646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2335g00021 17 143 SBP-box Gene Family AT3G15270 51.880 1.70e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pral2335g00021 SBP 4.7e-31 No_clan