Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2333g00016 ATGGCTCTCCTTACTTCCTTGCCCGAACAGTCAGATTCAGGTCCCGACTCACAAGTCCCAAAGCGCAAGCGAAATAAGCCGCAGAAGAAGCAGAAACCACCGTCTTCATGGGACCAAATCAAGAATCTCCTCACCTGCAAACAGATCCAAGGGTCGAGAGTTCACGACCCCTCCAAAAACCCCACCCCAGTGGGCTACTCCAAACTAGGATCTTCTTGCAGCTCCATCTGTAGTTTCAAAGACGTTGTTCACGGCAACACACGCGTTGTTCACAGGCCTGATAACTCCTCGCCGGAGAGCAGTGCTCTGGGTCAGCAAGCCGGGTTACTGAGCCGGAAGCCTCCGAATAACTCGTCATCTCGGTCGGCCAAATCCAACGGCGCTCCAAACGGCACTACATGTTCTAGAGGGATGCAATTCAGGAAACTCTCCGGCTGTTATGAATGTCGCATGATTGTTGACCCTTCCAGGCTCCCGATGCCGAGAAGCACTCTATGTTCTTGCCCTCACTGTGGAGAGTTCTTCCCTAAGATGGAAAGCTTGGAGCTTCATCAAGCTACTCGCCATGCCGTTTCAGAGCTGGGGCCGGAGGATTCGGGTCGAAATATTGTGGAGATAATATTCAAGTCAAGCTGGCTGAAGAAGGGCAGCCCCATCTGTAAGATCGAGCGGATACTCAAAGTCCACAACACCCAGCGCACCATCCAACGGTTCGAGGAGTGCCGAGACGCAGTGAAGAGCCGTGCTCAGTACAGCGTCAAGAAGAACCCCAGGTGCGCCGCCGACGGCAACGAGCTACTGCGATTCCACTGCATCAGCCTCTCATGCTCCTTGGGTGCACGTGGCTCCTCCTCCTTGTGCGGCTCGCTCCCCGGCTGCGGTGTGTGCACCATCATCCGCCACGGCTTCCAGGGCAAGTCTGATAGTGCCGGTGCGGCTGAGCAGCCACACTGCAAAGGAGTGCGGACCACGGCCAGCAGCGGTAGGGCCCACGACGCCTTGCAGTGTAACGATACTAGGAGGGCGATGCTGGTGTGCCGTGTCATTGCCGGGAGGGTGAAGCGCGTGGCGGAGGAGACTCCGGCGGAGGAGGAGACCGTATCGGCTGGGTCTTATGACTCGGTAGCCGGGAGCGCCGGGGTCTACTCGAATCTCGAGGAGTTGGTAGTGTTCAATCCGAAAGCTATCCTTCCTTGTTTCGTCGTGATTTACAAAGTGATGCCATGTTGA 1230 0.5626 MALLTSLPEQSDSGPDSQVPKRKRNKPQKKQKPPSSWDQIKNLLTCKQIQGSRVHDPSKNPTPVGYSKLGSSCSSICSFKDVVHGNTRVVHRPDNSSPESSALGQQAGLLSRKPPNNSSSRSAKSNGAPNGTTCSRGMQFRKLSGCYECRMIVDPSRLPMPRSTLCSCPHCGEFFPKMESLELHQATRHAVSELGPEDSGRNIVEIIFKSSWLKKGSPICKIERILKVHNTQRTIQRFEECRDAVKSRAQYSVKKNPRCAADGNELLRFHCISLSCSLGARGSSSLCGSLPGCGVCTIIRHGFQGKSDSAGAAEQPHCKGVRTTASSGRAHDALQCNDTRRAMLVCRVIAGRVKRVAEETPAEEETVSAGSYDSVAGSAGVYSNLEELVVFNPKAILPCFVVIYKVMPC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2333g00016 409 SUPERFAMILY ADP-ribosylation 191 405 - -
Pral2333g00016 409 ProSitePatterns Zinc finger C2H2 type domain signature. 166 189 IPR013087 -
Pral2333g00016 409 MobiDBLite consensus disorder prediction 1 15 - -
Pral2333g00016 409 Gene3D - 182 406 - -
Pral2333g00016 409 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 404 - -
Pral2333g00016 409 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 194 IPR013087 -
Pral2333g00016 409 MobiDBLite consensus disorder prediction 88 136 - -
Pral2333g00016 409 FunFam C2H2-like zinc finger protein 190 405 - -
Pral2333g00016 409 MobiDBLite consensus disorder prediction 90 136 - -
Pral2333g00016 409 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2333g00016 Pral-Chr2333 51806 54457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2333g00016 1 407 C2H2 Transcription Factor Family AT1G75710 61.935 1.37e-174 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral2333g00016 None None None