Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2330g00004 ATGAGTAAGACAGAATTACCAAGGACGAAGGCGCCCCCGGTTCCTTTGGCAACTTTGATTGGCCGCGAGCTCCGGAATGAAAAAGTTGAAAAACCTTTTGTGAGGTATGGACAGGCTGGCTTGGCAAAGAAAGGGGAGGATTACTTTTTAATCAAGACGGACTGCCAGAGGATTCCTGGGGATTCATCAACACTGTTTTCTGTATTTGCGATCTTTGATGGGCATAATGGTATATCAGCTGCTATTTTTGCAAAGGAAAATATACTTAATAATGTCATGAGTGCAATACCACAAGATATCAGCAGAGATGAGTGGCTTCAAGCTCTTCCTCGGGCTCTAGTTGTTGGGTTTGTGAAAACTGACATAGAATTTCAGCAAAAAGGCGAGACTTCTGGGACTACAGCAACATTTGTTCTGGTTGATGGTTGGACTGTCACTGTTGCATCAGTTGGGGATTCTCGATGTATATTAGATACCCAGGGAGGTGTAGTATCTCTTCTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAACGTGTCACTGCTAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTAGGACCCCTTCGCTGCTGGCCTGGCGGATTATGTCTTTCTAGATCGATTGGTGACACAGATGTCGGAGAATTTATTGTGCCAATTCCCCATGTTAAGCAAGTAAAGCTTTCAAATGCTGGTGGAAGACTTATCATAGCTTCTGATGGCATTTGGGATGCCTTATCTTCTGATATGGCTGCCAAGTCTTGTCGGGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTAGTTAAGGAGGCTTTAAGGTCGAGGGGACTGAAGGATGATACAACTTGCCTTGTTGTAGACATTATTCCTTCAGATCATCCTGTATTACCACCAATTCCGAAAAAGAAACATAATATGATAACTTCACTTCTCTTTGGGAAGAAATCTCAGAACTCCACTAACAAAGCTAGTAATAAGCTGTCTGCTGTGGGAGTTGTAGAGGAGTTATTTGAGGAGGGTTCTGCAATGCTTGCAGAAAGGCTTGGTAAGGATTTTCCTTTGAATGCAAACTCTGGGATTTTCCGTTGCGCAGTCTGCCAGGTGGATCAACCTCCTGGCGATGGTTTATCAGTGAACTCTGGCCCTTTCTTCTCGACCGCATCTAAGCCGTGGGAAGGTCCGTTCCTCTGTGCAAACTGCCGAAGGAAGAAAGATGCCATGGAAGGGAAAAGGCCTAGCAGACCCACAGTGACAGCATAG 1287 0.4538 MSKTELPRTKAPPVPLATLIGRELRNEKVEKPFVRYGQAGLAKKGEDYFLIKTDCQRIPGDSSTLFSVFAIFDGHNGISAAIFAKENILNNVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPPIPKKKHNMITSLLFGKKSQNSTNKASNKLSAVGVVEELFEEGSAMLAERLGKDFPLNANSGIFRCAVCQVDQPPGDGLSVNSGPFFSTASKPWEGPFLCANCRRKKDAMEGKRPSRPTVTA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2330g00004 428 SMART PP2C_SIG_2 50 297 IPR001932 -
Pral2330g00004 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Pral2330g00004 428 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Pral2330g00004 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Pral2330g00004 428 CDD PP2Cc 43 297 IPR001932 -
Pral2330g00004 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Pral2330g00004 428 Gene3D - 33 301 IPR036457 -
Pral2330g00004 428 PANTHER PROTEIN PHOSPHATASE 46 296 IPR015655 GO:0004722|GO:0006470
Pral2330g00004 428 SMART PP2C_4 25 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2330g00004 Pral-Chr2330 24817 28091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2330g00004 1 427 PP2C-type Phosphatase Gene Family AT1G09160 77.518 0.0 675