Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2330g00003 ATGGCCGCAGAACAGGTATTGCCATTTTCGGTGTTATCTGTTGTTGAAGATGTTCTTCAACAGCACGGGACCCGATGGAGTGATACCAACACGACGTCAAGGAAGCTTGAACCATCTTGCTTAAGAAGGTATGAAGCAGCTGGGTGGCTACGAAAGGCAAATGGAGTAGTTGGAGGGAAAGAGTTTCCAGCTGAGCCTTCTGAAGAAGAATTCAGGATTGGTCTGCGTAGTGGCATAATCCTTTGCAATGTTCTTAACAAAATTCAACCTGGAGTGGTACCCAAGGTAGTTGAAGGTCCCTGCGATTCCGATGATGGAGCCGCTGCACTATCTGCATTTCAGTACTTCGAAAATGTGAGGAACTGTCTTGTGGCTTTGCAAGAAATGGGGCTTCCAACCTTTCAAGCTTCTGATTTGGAGCAGGGAGGGAAATCGGCGAGGTTAGTGGATTGTGTCTTGGCAATCAAGGCATATAGTGAATGGAAAGAGGGAGGAAAAATGGGTTCATGGAAACATGGTGGGAATATAAAGCCGCTTGTTTCTGGAAGACCATTTTTACGCAAAAACTCAGAACAATTCCTCTCCAGTTTAACAAGAACCACAAGTGATCAATTTACATGCAGTGATCTCGGCCATGATCGCATCGAAGGGGGTTCAATTCAAAACTTGAATGTGCTACTTCGGGAATATTTGTCCGACAAGAAGCCTGAAGAAATTATCAACGTAGTGGAGTCCCTGCTTCGCAAAGTCACCGAGGAGTTTGAACGCCGCCTATTAATACAGGATGAAATGTCGAAAACAAATCCAGAAGATAAGGCCGCAGAATCTGAAACACACGACTCGATTTTAAAACTTGCTTCTGAGGATGAGGAGACGGAAGAAAAGGAAGATGTGCAGCCTAAGCAAGAAGAGTGCTATAATGAAAATCACTATATCAGTGAAGAATCAAGACTCCAAGCTCTGAACGAGCAGCAAAAGTTGGTTTCCCAACAACACAAAGAAATCCATATTAGTGATGAAGTAACAAGAATCCATGTTTCGAAGAACCAACAAAAGTTGCTAGCACAACAACACAGAGAGATCCAGTTACCCTTAATAGGTAAGCATGTGCGTAGCCTAGCTTCTGCTGCTTCAGGATATAGGAGAGTTCTCGAAGAAAATCGCAAGTTATACAATCAACTGCAGGACCTGAAAGGAAATATTAGGGTATACTGCCGAGTTCGACCGTTCTTTGGGCAAGCAAACAATGCTGGCTCTGTTGGTAGCATAGAGGAAGGAAGTATCTCAATGATAGCACCTTCCAAGTATGGAAAAGAAGGGAGGAAAACGTTTAATTTCAACAGAGTGTTTGGTCCTACAGCAACCCAAGCTGAAGTTTTTGAAGACATGCAGCCTCTTATTCGTTCTGTTCTGGATGGCTATAATGTCTGTATATTTGCTTATGGCCAGACTGGCTCAGGAAAGACTCATACTATGTCCGGACCAAATGATCTTACTGAGGAAACCGTGGGGGTAAACTATAGGGCATTAAGAGATCTTTTTCTACTGTCACAGCAGAGGAAAGACACTATTACCTACGACATTGGCGTTCAGATGCTTGAGATCTACAATGACCAAGTCAGAGATCTTCTAGCGACAGATGGTGGCAACAAAAAGTTAGATATTCGCAACAGTTCTCAAAACGGAATTAATGTACCAGATGCAACCCTCGTCCCCGTTTCATCAACTTCCGATGTCTTACGTTTGATGGACCTAGGACATAAGAATCGAGCAGTTAGTGCTACTGCTATGAATGATCGGAGTAGTCGTTCTCATAGTTGCCTGACAGTTCATGTTCAAGGAAGGGACATGACATCAGGAAGCCATCTTCGTGGCAGCATGCATCTCGTTGACCTGGCAGGAAGTGAGAGGGTCGATAAATCCGAGGTCACAGGTGACAGGCTCAAGGAGGCTCAACATATCAACAAGTCACTTGCTGCCTTAGGAGACGTCATTTCTTCGCTGGCTCATAAGCAAGCGCATGTTCCTTATAGGAATAGTAGACTTACTCAACTGCTTCAAGATTCTCTTGGAGGGCAAGCCAAGACACTCATGTTTGTACATATTAGCCCAGAATCTGATGCTCTAGGAGAAACACTCAGCACACTCAAGTTTGCAGAACGCGTCTCCACGGTTGAACTTGGTGCTGCTCGAGCTAACAAAGAGAGTTCAGAAGTGAAAGAGCTTAAAGAACAGATTGCTACTTTGAAGGCAGCTTTGGCAAGAAAGGAAGGAGAAGATGAACCGCTTCCACATTCTGTGAATAGTAGTCTGGATGCCCCAAAATTCAAATCTCTCAAGTCTTCTCCTACGCAATCTGGAGGTCATAGGAAACCCCAAGACGATTCTGGTAGTGTGGAGGTAATATGGAATTTCACAACGAAGTTGAAACGACGAAGCTTAGATCTCCAGGACATGATCATGCATTCACCTCCCTGGCCACCTGCAAGTAGTCAGAGGATGAACAGTAAAGAAGAGGATGGAGAGTCAGTTTCTGGGGACTGGGTTGAAAAGATCGTGGTGAACAGGAATGACAGCTTAACAAGTGATGATAGCCTAGTGGGTCAGTGGGAAGCAGAAAGTAAACAATCTTCTCCCTTGCTGAGTCCTAGTTCTCTTTCAGACGCTTCAAAAATATGCTCGGAACATTCCTTTAAAGTTACATTGAATAAAAAGGATAGCCAAGACTATGACATGGCCACCACAGATGACTCTGATGATCCGCTTGAGGTTGCAACTAGCGATTCCTCAGAATCAGACTTGCACTGGCAATTACATATGCCAAAACCAGCCAGTAAAATCAATGGAATAGTTTCTAAAGTTAAGAAACCCACCACCCATCACAAACTAGTAAAGAACGCCGAAGCCAGGAGCATGATTCCATCTTTGATCCCTGCACCGTCAAGGAAACAATTGATGATGAGTCAACCCAGAAAGCAGGCAAGTCCTATTGATGGAAAAAGAAGAACCGGGAATGCAAAATGGAACTTGAGTCTTTGTGCGCGAGAGAGAAAGAGAGGGGATTTTTCCTTTTACGTTGGAGGAGCAATAAACCAGTTGCTCGGCTTCTCTGGTGGTGAACGTGAGATCTTTTACATCCTGTTGGAATCAATGTGTTTTAGTGGCCGGATTTTTGTGGCCTTTTTTTGA 3189 0.4418 MAAEQVLPFSVLSVVEDVLQQHGTRWSDTNTTSRKLEPSCLRRYEAAGWLRKANGVVGGKEFPAEPSEEEFRIGLRSGIILCNVLNKIQPGVVPKVVEGPCDSDDGAAALSAFQYFENVRNCLVALQEMGLPTFQASDLEQGGKSARLVDCVLAIKAYSEWKEGGKMGSWKHGGNIKPLVSGRPFLRKNSEQFLSSLTRTTSDQFTCSDLGHDRIEGGSIQNLNVLLREYLSDKKPEEIINVVESLLRKVTEEFERRLLIQDEMSKTNPEDKAAESETHDSILKLASEDEETEEKEDVQPKQEECYNENHYISEESRLQALNEQQKLVSQQHKEIHISDEVTRIHVSKNQQKLLAQQHREIQLPLIGKHVRSLASAASGYRRVLEENRKLYNQLQDLKGNIRVYCRVRPFFGQANNAGSVGSIEEGSISMIAPSKYGKEGRKTFNFNRVFGPTATQAEVFEDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNDLTEETVGVNYRALRDLFLLSQQRKDTITYDIGVQMLEIYNDQVRDLLATDGGNKKLDIRNSSQNGINVPDATLVPVSSTSDVLRLMDLGHKNRAVSATAMNDRSSRSHSCLTVHVQGRDMTSGSHLRGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLAALGDVISSLAHKQAHVPYRNSRLTQLLQDSLGGQAKTLMFVHISPESDALGETLSTLKFAERVSTVELGAARANKESSEVKELKEQIATLKAALARKEGEDEPLPHSVNSSLDAPKFKSLKSSPTQSGGHRKPQDDSGSVEVIWNFTTKLKRRSLDLQDMIMHSPPWPPASSQRMNSKEEDGESVSGDWVEKIVVNRNDSLTSDDSLVGQWEAESKQSSPLLSPSSLSDASKICSEHSFKVTLNKKDSQDYDMATTDDSDDPLEVATSDSSESDLHWQLHMPKPASKINGIVSKVKKPTTHHKLVKNAEARSMIPSLIPAPSRKQLMMSQPRKQASPIDGKRRTGNAKWNLSLCARERKRGDFSFYVGGAINQLLGFSGGEREIFYILLESMCFSGRIFVAFF 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2330g00003 1062 Coils Coil 732 759 - -
Pral2330g00003 1062 ProSiteProfiles Calponin homology (CH) domain profile. 40 160 IPR001715 GO:0005515
Pral2330g00003 1062 ProSitePatterns Kinesin motor domain signature. 625 636 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral2330g00003 1062 Gene3D - 34 160 IPR036872 -
Pral2330g00003 1062 Gene3D Kinesin motor domain 395 763 IPR036961 -
Pral2330g00003 1062 MobiDBLite consensus disorder prediction 909 928 - -
Pral2330g00003 1062 CDD CH_AtKIN14-like 42 157 - -
Pral2330g00003 1062 FunFam Kinesin-like protein KIN-14I isoform A 395 767 - -
Pral2330g00003 1062 MobiDBLite consensus disorder prediction 820 845 - -
Pral2330g00003 1062 Pfam Kinesin motor domain 406 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral2330g00003 1062 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 905 IPR027640 GO:0003777|GO:0007018
Pral2330g00003 1062 MobiDBLite consensus disorder prediction 755 799 - -
Pral2330g00003 1062 MobiDBLite consensus disorder prediction 771 792 - -
Pral2330g00003 1062 SUPERFAMILY Calponin-homology domain, CH-domain 46 172 IPR036872 -
Pral2330g00003 1062 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral2330g00003 1062 PRINTS Kinesin heavy chain signature 626 644 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral2330g00003 1062 PRINTS Kinesin heavy chain signature 595 612 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral2330g00003 1062 PRINTS Kinesin heavy chain signature 675 696 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral2330g00003 1062 Pfam Calponin homology (CH) domain 44 159 IPR001715 GO:0005515
Pral2330g00003 1062 ProSiteProfiles Kinesin motor domain profile. 400 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral2330g00003 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 757 IPR027417 -
Pral2330g00003 1062 CDD KISc_C_terminal 398 727 - -
Pral2330g00003 1062 SMART ch_5 42 158 IPR001715 GO:0005515
Pral2330g00003 1062 Coils Coil 380 400 - -
Pral2330g00003 1062 SMART kinesin_4 398 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2330g00003 Pral-Chr2330 16861 22661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2330g00003 388 763 Calmodulin-binding Proteins AT5G65930 41.842 4.13e-79 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2330g00003 K10406 - gmx:100799535 1216.06