Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2329g00002 ATGGACATAACCCCCACAATCGCCAACAACACCGCCCCCAACACTCCTACCATTTCAAAATCCCCGGAACATGACAGTGAAACACCGACGAGGATCCCTACCGCCGCCAAGCCCTTGTGCTTCTCCAACGGAGTCCTAAAGCGCCGCCGCCGCCGCCGCCTCGCCGCCCAGCCACTGCCTTTCACGTACAAGGAATGCTTGAAAAACCATGCAGCCAGCTTGGGAGGCCACGCCTTGGACGGTTGTGGCGAGTTCATGGCCTCTCCCAGCGCCAACCCCGCCGACCCAAGCTCCATCAGATGCGCCGCCTGTGGCTGCCACCGCAATTTCCACCGCCGTGAGCCAGAAGAGCCTATCTCCACAACCCACGTCATCGAGTACCAGTCTCACCATCGACACCATCCCCCACCGCCTCTTCCTTTTCAGGTTCCCAATCGAAGCCCCTGTTCGGCGTCGCCACCTCCGATCTCCTCTTCGTACTGCCCGTCCGCACCCCACATGCTCCTGGCTCTCCCATCAGCCGGTATACAAGCTCCTCCGGAGAGCGCGGCTGCTCCCGCAAACGCTCTTGCAACGCCGAGCCCGAATGCGCGGAAGCGGTTGAGGACCAAGTTCACCCAGGATCAAAAGGAAAAGATGTACCATTTCGCGGAGAGGGTGGGGTGGAAGATGCCGAAAAGGGACAAAGAATTGGTTCAAGAGTTCTGCAATGATGTTGGGGTCAACAGGGGAGTGTTGAAGGTTTGGATGCACAACAACAAGAATACTTTTGGCAAGAGAGATGTCGCTAATAATAATGATGGTAGGAACACCCTAGAGCAAGAACCGAACTCACACCCTCACCGTTGA 849 0.5736 MDITPTIANNTAPNTPTISKSPEHDSETPTRIPTAAKPLCFSNGVLKRRRRRRLAAQPLPFTYKECLKNHAASLGGHALDGCGEFMASPSANPADPSSIRCAACGCHRNFHRREPEEPISTTHVIEYQSHHRHHPPPPLPFQVPNRSPCSASPPPISSSYCPSAPHMLLALPSAGIQAPPESAAAPANALATPSPNARKRLRTKFTQDQKEKMYHFAERVGWKMPKRDKELVQEFCNDVGVNRGVLKVWMHNNKNTFGKRDVANNNDGRNTLEQEPNSHPHR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2329g00002 282 FunFam Zinc-finger homeodomain protein 2 186 259 - -
Pral2329g00002 282 MobiDBLite consensus disorder prediction 256 282 - -
Pral2329g00002 282 Gene3D - 187 258 - -
Pral2329g00002 282 Pfam ZF-HD protein dimerisation region 62 115 IPR006456 -
Pral2329g00002 282 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 114 IPR006456 -
Pral2329g00002 282 NCBIfam homeobox domain, ZF-HD class 198 255 IPR006455 -
Pral2329g00002 282 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 50 256 - -
Pral2329g00002 282 MobiDBLite consensus disorder prediction 257 273 - -
Pral2329g00002 282 MobiDBLite consensus disorder prediction 1 34 - -
Pral2329g00002 282 MobiDBLite consensus disorder prediction 1 23 - -
Pral2329g00002 282 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 62 114 IPR006456 -
Pral2329g00002 282 SUPERFAMILY Homeodomain-like 192 259 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2329g00002 Pral-Chr2329 18721 19598 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2329g00002 1 268 ZF-HD Transcription Factor Family AT3G28920 50.350 1.64e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pral2329g00002 ZF-HD_dimer 5.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2329g00002 - - jre:108985975 337.806