Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2325g00004 ATGGGGATTTGCTGGGGTTCTCCAGAGGACAACCCAGGCATCACCAGCACATCTGATCACCTTAGTGCAGCTACAACGGGAACATCCCGGACTACCAGCAATGCTACTACCGCTACTACTTCTTACGGGAGCGGAAGCATCTCCATAAATAGCCAGTTTTCCGAGTCCAGTGGTGGCGAAGCTTATCCAAATGGGCAGATTTTGCCTGCTGCAAATTTAAGGACATTCACTTTTGCAGAATTGAAGGCTGCTACTAAGAATTTTAGAGTTGATACAGTACTTGGAGAAGGAGGCTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAAAAGGCAACACCAAAAAATGGAAGTGGAACGGTCGTTGCCGTTAAAAAATTGAACTCAGAGAGCTTACAAGGATTTGAGGAATGGCAGTCGGAAATAAATTTTCTGGGACGGCTTTCTCATCCTAACCTCGTTAAGCTGTTAGGATACTGTTGGGAAGAAAATGAGCTTCTTCTCGTCTATGAATTCATGCAAAAGGGCAGTCTGGAAAATCATTTATTTGGAAGGGGTTCTGCTGTTCAACCACTTTCATGGGACATTAGGCTTAAGATTGCAATTGGAGCGGCTCGTGGTTTGGCATTCTTGCACACATCTGAGAAAGTAATTTACCGTGATTTCAAGGCCTCCAATATATTGCTCGATGGGTCTTATACTGCAAAAATTTCAGACTTCGGCTTGGCAAAATTGGCACCTTCAGCTAGTCGATCCCATGTAACAACAAGGGTGATGGGCACGTTTGGCTATGCGGCTCCTGAATATGTGGCAACAGGGCATCTGTACGTGAAGAGTGACGTGTATGGATTTGGAGTTGTTTTGGTTGAGATCCTGACAGCCCTTCGGGCACTAGATCAAAACCGCCCCAGCGGCCAACATAGTCTTGTGGACTGGGTGAAACCATACTTACATGATGGAAGAAAATTGAAGAGCATAATGGATTCACGGTTGGAGGGAAAATATCCATCCAAATCTGCTTTTCGTATAGCTCAACTTGCTTTAAAATGTCTTGCATTAGAACCTAAACATCGGCCATCAATGAAGGAAGTTTTGGAGAACTTGGAGCGGATTCAGGCTGCCAATGACAGGCCTGGAGAGCCTAGACTCCGTTCTACTCGTAACGTGGCTTCCCATCGTGTTACCCGACCTTTGCGCCCTCGATCTCATTGA 1209 0.4566 MGICWGSPEDNPGITSTSDHLSAATTGTSRTTSNATTATTSYGSGSISINSQFSESSGGEAYPNGQILPAANLRTFTFAELKAATKNFRVDTVLGEGGFGKVFKGWLEEKATPKNGSGTVVAVKKLNSESLQGFEEWQSEINFLGRLSHPNLVKLLGYCWEENELLLVYEFMQKGSLENHLFGRGSAVQPLSWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYTAKISDFGLAKLAPSASRSHVTTRVMGTFGYAAPEYVATGHLYVKSDVYGFGVVLVEILTALRALDQNRPSGQHSLVDWVKPYLHDGRKLKSIMDSRLEGKYPSKSAFRIAQLALKCLALEPKHRPSMKEVLENLERIQAANDRPGEPRLRSTRNVASHRVTRPLRPRSH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2325g00004 402 Pfam Protein tyrosine and serine/threonine kinase 90 367 IPR001245 GO:0004672|GO:0006468
Pral2325g00004 402 ProSiteProfiles Protein kinase domain profile. 88 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2325g00004 402 MobiDBLite consensus disorder prediction 371 386 - -
Pral2325g00004 402 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 172 379 - -
Pral2325g00004 402 MobiDBLite consensus disorder prediction 371 402 - -
Pral2325g00004 402 MobiDBLite consensus disorder prediction 1 41 - -
Pral2325g00004 402 CDD STKc_IRAK 94 370 - -
Pral2325g00004 402 ProSitePatterns Protein kinases ATP-binding region signature. 94 125 IPR017441 GO:0005524
Pral2325g00004 402 MobiDBLite consensus disorder prediction 10 41 - -
Pral2325g00004 402 SUPERFAMILY Protein kinase-like (PK-like) 69 369 IPR011009 -
Pral2325g00004 402 Gene3D Phosphorylase Kinase; domain 1 72 171 - -
Pral2325g00004 402 Gene3D Transferase(Phosphotransferase) domain 1 172 388 - -
Pral2325g00004 402 PANTHER OS01G0588500 PROTEIN-RELATED 38 371 - -
Pral2325g00004 402 FunFam Serine/threonine-protein kinase BIK1 55 171 - -
Pral2325g00004 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2325g00004 Pral-Chr2325 25036 31513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2325g00004 65 371 Receptor kinase-like Gene Family AT4G02010 50.804 9.26e-101 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral2325g00004 PK_Tyr_Ser-Thr 5.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2325g00004 - - gmx:100305417 616.69