LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2323g00005	ATGGGATCACTTCCTCAGGAATCATCGTATTCTCCGACTTCTCATCATCAGAGAATGCTTCAACAAGTTACTGGAGAAATTGATGCAGCAAGTTCGTTACTGATTCGAAGCTACAAGAGAAGTTTCAATGGGTTCGCTGCAAAACTCACAGAAGAGCAAAGAGAAAAGATTGCTCAAATGGAAGAAGTTGCATCTGTTTTTCCAAGCACAACACTTCACACTCAGACGACCAGATCGTGGGATTTCATGGGTTTGGTCGAAAAAACCAAACGGAACGTATCTGCTGAAAGTGATGTCATAATCGGATTTCTTGACACTGGAATCTGGCCTGAATCGGAGAGTTTTACTGATAAAGGTTTTGGTCCTCCTCCTAAGAAATGGAGAGGAACATGTGCAGGTGGGAAAAACTTCACATGCAACAACAAAGTCATAGGAGCTCGATTCTACAAGGAAGACTCTGCAAGAGACAATGCCGGGCATGGATCTCATACGGCCTCAACAGCAGCAGGAAACAACGTTAATGGCGCAAGCTTTTATGGTATAGCAGAAGGCACTGCGAGAGGAGGGGTTCCATCTGCGAGAATTGCTGTATACAAAACCTGCGATAGTCAAGGGTTCTGCAATACTGCTGGAATCTTGGCTGCTTTCGATGATGCCATTGCAGATGGAGTTGACATACTGTCAGTTTCAATTGGAGGGATGTTTGCTCCAGACAATTTGTACGATGATTCCATCACGATTGGTTCCTTTCATGCTATGGCCAAAGGGATACTCACAGTGCAATCTGCAGGAAATGGTGGGCCTTATTCAGAAGAAGTGATCAGTGTTGCACCATGGATCCTCACAGTTGCAGCAAGCCATACGGATCGCCAAATCGTCGACAAGCTTGTTCTTGGGAATGGCACAACCTTAGTGGGAGATTCAGTGAATGCTTTTGATCCAAAAGGGACCAAATATCCCATAGCCAAGTGTGTGGATCGAAATTATTCCGACCTTTGTGTTTGTCTGAAAAGTGAAATCCAAGGAAAGATTGTGTTATGTGGTGCACAGATAGACCTTAATGTTCACGAAGCTGGTGCAGTTGGTGCAATTGGACGAGGTAGTACTCAAAGTCTTCTTGCACCACCTGATGTGAGTGTATTTCCTTATCTCACATTATCTGAAAACGACTATGATGTTGTTGAGTCATACTCAAGATCATCAGCAAATCCAGAGGCTGGGATAATGAAGAGCGAGAGTATTGTGGATAATACTGCTCCAAGAGTGGCTGAGTTCTCTTCACGAGGGCCAAACATAGCAGTCCCAGAAATCCTAAAACCAGATATAACTGCACCAGGAGTGCATATCTTAGCCGCATATTCTCCTCTAGCTCCACCATCAGGCAATGACGAGTTCGACTTAAGAAGGGGAATTAAGTACAGCATTATGTCTGGAACCTCCATGTCATGTCCTCATGCATCTGGAATAGCCGCATACGTGAAAAGTTTTCATCCAGATTGGTCTCCGGCAGCCATCAAATCCGCAATTATGACGACAGCTAAACCTATGAATATTCCTACTAATGATGACGATCATGTTGATGATTTTGCTTATGGATCAGGACATGTTAATCCTGTGCGAGCTATTGATCCAGGACTTGTTTATGATATCTCAAAACAAGAATACTTAGAACTTCTCTGCAATCTTGGTTACAACACTTCAATCATCAAAAAAATCTCTGGTGATCACAAGGTCACTTGTCCCAAATCTCCTGATAGATCCTTGATAAGAAATACAAACTTTCCTTCGATGTTAGCAGAAGTGAAATCTATGAAACCTTTTGATGTTAAGATTAATCGAACAGTCACAAATGTTGGATTTGTCTACTCAAAGTACGAGGTGACTGTACGATCAACTCAAGGAGTGAACATTACCGTGGAACCTAAGGTGTTGTCCTTCCAGTCTTCGAGGGAGAAACAATCATTTGTTGTGAGAATTGTGGGAGGGAAATTACCAGCAGAAACGGTGGTGTCCTCATCACTTGTATGGTCAGATGGCACTCATAATGTTAGGAGTCCTATTATTGTGAATGTTTTGAACTCGACTAGAGGTTAA	2094	0.4288	MGSLPQESSYSPTSHHQRMLQQVTGEIDAASSLLIRSYKRSFNGFAAKLTEEQREKIAQMEEVASVFPSTTLHTQTTRSWDFMGLVEKTKRNVSAESDVIIGFLDTGIWPESESFTDKGFGPPPKKWRGTCAGGKNFTCNNKVIGARFYKEDSARDNAGHGSHTASTAAGNNVNGASFYGIAEGTARGGVPSARIAVYKTCDSQGFCNTAGILAAFDDAIADGVDILSVSIGGMFAPDNLYDDSITIGSFHAMAKGILTVQSAGNGGPYSEEVISVAPWILTVAASHTDRQIVDKLVLGNGTTLVGDSVNAFDPKGTKYPIAKCVDRNYSDLCVCLKSEIQGKIVLCGAQIDLNVHEAGAVGAIGRGSTQSLLAPPDVSVFPYLTLSENDYDVVESYSRSSANPEAGIMKSESIVDNTAPRVAEFSSRGPNIAVPEILKPDITAPGVHILAAYSPLAPPSGNDEFDLRRGIKYSIMSGTSMSCPHASGIAAYVKSFHPDWSPAAIKSAIMTTAKPMNIPTNDDDHVDDFAYGSGHVNPVRAIDPGLVYDISKQEYLELLCNLGYNTSIIKKISGDHKVTCPKSPDRSLIRNTNFPSMLAEVKSMKPFDVKINRTVTNVGFVYSKYEVTVRSTQGVNITVEPKVLSFQSSREKQSFVVRIVGGKLPAETVVSSSLVWSDGTHNVRSPIIVNVLNSTRG	697

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2323g00005	697	Pfam	Subtilase family	97	534	IPR000209	GO:0006508\|GO:0008236
	Pral2323g00005	697	Gene3D	-	559	692	-	-
	Pral2323g00005	697	PRINTS	Subtilisin serine protease family (S8) signature	96	115	IPR015500	-
	Pral2323g00005	697	PRINTS	Subtilisin serine protease family (S8) signature	477	493	IPR015500	-
	Pral2323g00005	697	PRINTS	Subtilisin serine protease family (S8) signature	156	169	IPR015500	-
	Pral2323g00005	697	Gene3D	-	289	415	-	-
	Pral2323g00005	697	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	74	IPR037045	-
	Pral2323g00005	697	Gene3D	Peptidase S8/S53 domain	98	555	IPR036852	GO:0004252\|GO:0006508
	Pral2323g00005	697	ProSiteProfiles	Serine proteases, subtilase domain profile.	79	542	-	-
	Pral2323g00005	697	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	28	689	IPR045051	-
	Pral2323g00005	697	ProSitePatterns	Serine proteases, subtilase family, serine active site.	478	488	IPR023828	-
	Pral2323g00005	697	CDD	PA_subtilisin_like	296	408	-	-
	Pral2323g00005	697	SUPERFAMILY	Subtilisin-like	96	546	IPR036852	GO:0004252\|GO:0006508
	Pral2323g00005	697	CDD	Peptidases_S8_3	72	513	IPR034197	-
	Pral2323g00005	697	Pfam	Fibronectin type-III domain	592	689	IPR041469	-
	Pral2323g00005	697	Pfam	Peptidase inhibitor I9	7	74	IPR010259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2323g00005	Pral-Chr2323	44203	48891	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2323g00005	1	689	Subtilisin-like Serine Gene Family	AT3G46850	53.814	0.0	732

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2323g00005	-		-	qsa:O6P43_020998	792.727