LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2323g00004	ATGGTTAAGCGTTCTTCAATTATTTTCTTCACATGTATTGTAATTCTCTTAATATGCGATGCTGCTTCTGATGTCGAACACAGGAAAACTTATGTAGTATACATGGGATCACTTCCTGAGGAATCATCGTACTCTCCGATTTCTCATCATCTGGGAATGCTTCAACAAGTTACTGGAGAAACCGATGCCGCAAGTTCATTGCTGATTCGAAGCTACAAGAGAAGTTTCAATGGGTTCGCTGCAAAGCTCACAGAAGAGCAAAGAGAAAAGATTGCTCGAATGGAAGGAGTGGCGTCTGTTTTTCCAAACACAGTACTTCACACTCATACAACCAGATCGTGGGACTGCATTGGTTTGGTTGAGTCAGTCAAGCGAAACGTTTCAGGTGAAAGTGATGTCATAATCGGATTTCTTGACACTGGAATCTGGCCTGAATCTGAGAGTTTTACAGATAAAGGTTTTGCTCCTCCTCCTAAGAAATGGAAAGGAACTTGTGCCGGTGGGAAAAACTTCACATGTAATAACAAAATCATAGGAGCTCGATTCTACAGAGGAGACTCTGCTAGAGATGATGTCGGCCACGGATCTCATACGGCCTCAATAGCAGCTGGAAACAACGTTAATGGCGCGGGCTTTTATGGTATAGCAGAAGGCACTGCAAGAGGAGGGGTCCTATCTGCGAGAATTGCTGTATACAAACCCTGCGATAATGAAGGGTGCAGTGATGCGGGAATCTTGGCTGCTTTCGATGATGCCATAGCAGATGGAGTTGACATACTTTCGCTTTCACTCGGAGGGATGTTTCCTCCTGACGATTTATACAATGACGGTGGCATCTCGATCGGTTCCTTCCATGCTATGGCCAAAGGGATACTCACAGTGCAATCTGCAGGAAACGAAGGGCCCGATCCAAACTCATTGACAAGTGTTGCGCCATGGATCCTCTCAGTTGCAGCAAGCACCACAGATCGCCAAATCATAGACAAGCTTGTTCTTGGCAATGGAGCAACCTTAGTGGGAGATTCAGTGAATGCTTTTGATCCAAACGGGACCAAGTATCCCTTAGCCAAATGTAAGGATCGAATCTATTCCGACGTTTGCGAGTGTCTGAAAAGTGAGATCCAAGGAAAGACAGTGTTATGCAACACTCGTATAGACATTAAGGCTCATGAAGCTGGTGCAGTTGGAGCGATTGTAAAGGATAGTGGTGTAAGCAATGGACCAACCGGTGTGACTTTATTTCCTTATCTCACATTATCTCCAAAAGAGTATAATGTTGTTGCGTCATACTCAAGATCATTATCAAATCCAGAGGCTGAGATAATGAAGAGTGAGAGTATTGCGGATGATAATGCTCCGAGAGTAGCTAAGTTTTCTTCACGTGGGCCAAGCGTAGCAGTCCCAGAAATCCTAAAACCAGATATAACTGCACCAGGAGTGAATATCTTGGCAGCATATTCTCCTCTGGCTTCACCATCAGGTCATGATGATTTAGACCCTAGAAGGGTTAAGTACAATATCATCTCAGGAACCTCTATGGCATGTCCTCATGCATCTGGAATAGCTGCATATGTGAAAAGTTTTCATCCAAATTGGTCTCCGGCAGCCATCAAATCTGCGATTATGACAACAGCTAAACTTATAAATGGTCCTAAAGATCACTTTTCTTATGGATTAGGACATGTTAATCCCATGCAAGCTGTTGATCCTGGACTTGTTTATGACCTTTCAAAACAAGATTACCTAGAACTTCTCTGCAATCTTGGTTATAACACTTCAATCATCAAACGAATATCTGGTGATCAAAGTGTCACATGCCCCAAATCTCCTGCTAGACCCTTGATAAGAAATACGAACTTTCCTTCAATACTAATAGAAGAACAATCCATGAAACCATTTGATGTTCAGATTAATCGAATAGTCACAAATGTTGGATTTGCTAACTCAGAGTACAATGTATCTGTACAGTCAACTTCAGGAGTCAACATTACAGTAGAACCTAAGGTGTTGTCCTTCAAGTCTTTCAGTGAGAAACAATCTTTTGTTGTAAGAATTGTGGGAGGGAAATTACCAGCAGGCTCAGTGTTGTTCGCATCACTTGTATGGTCAGACGGCACTCATAATGTTAGGAGTCCTATTATTGTGAACATTTTGAAGTCGACTAGAGGTTAA	2172	0.4259	MVKRSSIIFFTCIVILLICDAASDVEHRKTYVVYMGSLPEESSYSPISHHLGMLQQVTGETDAASSLLIRSYKRSFNGFAAKLTEEQREKIARMEGVASVFPNTVLHTHTTRSWDCIGLVESVKRNVSGESDVIIGFLDTGIWPESESFTDKGFAPPPKKWKGTCAGGKNFTCNNKIIGARFYRGDSARDDVGHGSHTASIAAGNNVNGAGFYGIAEGTARGGVLSARIAVYKPCDNEGCSDAGILAAFDDAIADGVDILSLSLGGMFPPDDLYNDGGISIGSFHAMAKGILTVQSAGNEGPDPNSLTSVAPWILSVAASTTDRQIIDKLVLGNGATLVGDSVNAFDPNGTKYPLAKCKDRIYSDVCECLKSEIQGKTVLCNTRIDIKAHEAGAVGAIVKDSGVSNGPTGVTLFPYLTLSPKEYNVVASYSRSLSNPEAEIMKSESIADDNAPRVAKFSSRGPSVAVPEILKPDITAPGVNILAAYSPLASPSGHDDLDPRRVKYNIISGTSMACPHASGIAAYVKSFHPNWSPAAIKSAIMTTAKLINGPKDHFSYGLGHVNPMQAVDPGLVYDLSKQDYLELLCNLGYNTSIIKRISGDQSVTCPKSPARPLIRNTNFPSILIEEQSMKPFDVQINRIVTNVGFANSEYNVSVQSTSGVNITVEPKVLSFKSFSEKQSFVVRIVGGKLPAGSVLFASLVWSDGTHNVRSPIIVNILKSTRG	723

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2323g00004	723	SUPERFAMILY	Subtilisin-like	117	569	IPR036852	GO:0004252\|GO:0006508
	Pral2323g00004	723	Pfam	Peptidase inhibitor I9	30	109	IPR010259	-
	Pral2323g00004	723	PRINTS	Subtilisin serine protease family (S8) signature	130	149	IPR015500	-
	Pral2323g00004	723	PRINTS	Subtilisin serine protease family (S8) signature	190	203	IPR015500	-
	Pral2323g00004	723	PRINTS	Subtilisin serine protease family (S8) signature	509	525	IPR015500	-
	Pral2323g00004	723	Gene3D	Peptidase S8/S53 domain	132	581	IPR036852	GO:0004252\|GO:0006508
	Pral2323g00004	723	CDD	Peptidases_S8_3	106	545	IPR034197	-
	Pral2323g00004	723	FunFam	Subtilisin-like protease SBT5.3	20	109	-	-
	Pral2323g00004	723	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	31	715	IPR045051	-
	Pral2323g00004	723	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	18	109	IPR037045	-
	Pral2323g00004	723	Pfam	Subtilase family	131	560	IPR000209	GO:0006508\|GO:0008236
	Pral2323g00004	723	ProSiteProfiles	Serine proteases, subtilase domain profile.	113	568	-	-
	Pral2323g00004	723	Gene3D	-	323	448	-	-
	Pral2323g00004	723	Gene3D	-	585	718	-	-
	Pral2323g00004	723	ProSitePatterns	Serine proteases, subtilase family, serine active site.	510	520	IPR023828	-
	Pral2323g00004	723	Pfam	Fibronectin type-III domain	618	715	IPR041469	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2323g00004	Pral-Chr2323	32795	36863	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2323g00004	1	717	Subtilisin-like Serine Gene Family	AT5G58830	51.226	0.0	723

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2323g00004	-		-	qsu:111995816	793.112