Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2322g00003 ATGGCATCTTCTGCTTCTTCTTCCCAAGTTCCTTGTGGCAAACATGATGTTTTTATCAGCTTTAGAGGATCAGACATTAGATCTGATTTTCTCAGCCATTTGAAAAGGGCATTGCGTCAAAAGAACGTAGATATCTATGTGGATGATAGGCTTGAGAGAGGAGAAGAAATATGGTCAGCACTTGTGAATGCAATAGAAGGATCCATGATTGCTTTGGTTATATTCTCGGACAATTATGCTTCTTCAAAGTGGTGCTTGGAAGAGCTAGTGAAAATCGTGGAATGTAAAAAAGCTAATCAACAGATTGTGATTCCAATATTTTACCGTGTGGATCCATCACATGTCAGGCATCAAACACACACTTATGCAGATGCATTTACTCATCATGAACAAAGGTTCCCGGACAACATGCACAATTTGGAAAATTGGAGATCTGTTTTGAAAGAAACTGCTCACTTATCCGGTTATCATTCATCAAATTTTCAAGATGAATCTGAACTCATCAATGCAATAGTTGAAGATGTCTTTAAAAAATTGGAAGTTAACACTCCAATTGTACCAAGATCTCAGCTCATTGGATTTCATCAAAATTTCACTAATGTTGAATCATTAATGAAAATTGAGTCACCAGAAGTTCGAGTTCTTGGAATTTGGGGCCCAGGAGGGATAGGCAAAACAACCTTTGCTTCTACTATATTTGACAACTTCTTGTCTAAATTTGAAAGTCACTGTTTCTTAGAAAATGTGAGAGAAGAATCAACAAAGATTGGGTTAAGCTCTTTGCGTCAAAAACTTCTTTCCAAGCTATTAGATCAAAAAGATTACATAAATATGAATCACGCAATGAGAAGGTTGAAACAAAAAAAAGTGCTAATTGTAATTGATGATGTGGACAATCCAAAGCAACTAAAAGATTTGGCTCGACAACAACTTCACTTGGGACAGGGAAGCAGAGTCATTGCAACAAGTAGAGACAAGCATGTTCTTAGAAGTGGAGGGATTCATGAAAAATATATACATGAAGTCAGAGAATTGAGTAGAAAAGAATCACTTGAACTTTTCAGTATGCATGCCTACAATCAAAATCATCCCATTAAGGAATATGAAGAGCTATCAAATTTGACAGTTGCCTTGGCCGGAGGCATTCCTTTAGCTTTAGAAGTTCTAGGTTCCCATTTTCATTCAAGAGATGAAGCATATTGGAAAAGTGAGCTTAGCAAACTCCAAAAGTATCCCCATCAGGTATTCAAAATAAAAGGTCAAGTTATTCTTGTGCTAGAGGCTTGTGGTTTCAAAGCGGTTAGTGGAATACAAAATCTTATAGATAAAGCTCTCATAAAGTCAGATGGGTATCATCGTATTGTAATGCATGACTTGATACGAGAAATGGCTGAGCAAATAGTTCGTGAGGAATGTGTGAAACATCCTGAATTCCGTAGTCGATTAAATGATGAAGATGAAATATGTGATGTGTTAGAAAATAACAAGGGAACCGATGAAATTGAAGGCATTTCACTGGATGTGTCTCGAATCAAATATTTACATGTGAGAGCAAACCCCTTCTTAAAGATGAAAAAATTGAGAATCCTCAAAGTTTTTAATGGGCAATGGTCTGAAACCATGTTTCCTTTTGATCTTGACTCTTTTCCTAATGCATTAAAATATTTTTGGTGGGATTATTACCCATGTGAGTCTTTGCCATCAGGCTTTTGTCCTGAAAACCTTGCTAAACTACGAATGAGCAGAAGCAATGTTACAAAGCTTTGGGATGGAGTACAGGATCTTGTGAATCTAAAGACAATTGATTTGAGCCAGTCCTTTGAATTGATGGAATTGCCTGATTTTTCTATGGCACATAAGCTTGAAAATGTAAATCTCTATGATTGTGTAAGTTTGAGGAGTGTCCATCCATCCATTTTATCTCTTCCCACTCTTGTTGCATTGGATGTATCTGGTTGCGGTAAAGTAGAGAGTCTTGAAAGTGAGACTCATTTAGAATCTCTTTCTAATCTCACGACTTCCCGTTGTGGCCTCAAGAAATTACGTTTTCTTCCAATAAATGAGCTGTGTTGCTTGACAAACCTTGAGGTGTTTGATGTTTGTGATTTCAAGCAAGAAATTCACACAGAGGAGCTGCACTCCCTTTTTGATGCTTGGCGTAATTTAGGAAGTCTATGTTTGATCGGGTGGAGTTACTTGTCGGGAATCCCTAGCAATATCAAGTGCTTAACAAGGTTACAACATTTATCATTGGACGAGAGTGGTGTGGAGACATTGCCAGCTGGCGTCAGCCATCTTTCAAGCTTGATAACAATTCGCCTGCGAGAGTGCAAAAGGTTGAAGTCTATACTTGGACTTCCTCCCATGCTTGAAGAATTATATGCCACTAATTGCACTTTATTGGAGACCGTATCCTCTGACTCTCTCCTTTTCAATCCGTGTCGCCTTCACTTCGAAAATTGTGTAAAGTTGGATGAGTGTTCGCTTGGCGTTATCGAGGAATCTGCTCATTCCTTATGCACTTCATCCCCTGTTAGGAGTCCTCGGCCACATCCTTTTGCTTGTTACGCATGA 2574 0.3827 MASSASSSQVPCGKHDVFISFRGSDIRSDFLSHLKRALRQKNVDIYVDDRLERGEEIWSALVNAIEGSMIALVIFSDNYASSKWCLEELVKIVECKKANQQIVIPIFYRVDPSHVRHQTHTYADAFTHHEQRFPDNMHNLENWRSVLKETAHLSGYHSSNFQDESELINAIVEDVFKKLEVNTPIVPRSQLIGFHQNFTNVESLMKIESPEVRVLGIWGPGGIGKTTFASTIFDNFLSKFESHCFLENVREESTKIGLSSLRQKLLSKLLDQKDYINMNHAMRRLKQKKVLIVIDDVDNPKQLKDLARQQLHLGQGSRVIATSRDKHVLRSGGIHEKYIHEVRELSRKESLELFSMHAYNQNHPIKEYEELSNLTVALAGGIPLALEVLGSHFHSRDEAYWKSELSKLQKYPHQVFKIKGQVILVLEACGFKAVSGIQNLIDKALIKSDGYHRIVMHDLIREMAEQIVREECVKHPEFRSRLNDEDEICDVLENNKGTDEIEGISLDVSRIKYLHVRANPFLKMKKLRILKVFNGQWSETMFPFDLDSFPNALKYFWWDYYPCESLPSGFCPENLAKLRMSRSNVTKLWDGVQDLVNLKTIDLSQSFELMELPDFSMAHKLENVNLYDCVSLRSVHPSILSLPTLVALDVSGCGKVESLESETHLESLSNLTTSRCGLKKLRFLPINELCCLTNLEVFDVCDFKQEIHTEELHSLFDAWRNLGSLCLIGWSYLSGIPSNIKCLTRLQHLSLDESGVETLPAGVSHLSSLITIRLRECKRLKSILGLPPMLEELYATNCTLLETVSSDSLLFNPCRLHFENCVKLDECSLGVIEESAHSLCTSSPVRSPRPHPFACYA 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2322g00003 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 671 IPR044974 GO:0006952
Pral2322g00003 857 Pfam NB-ARC domain 202 413 IPR002182 GO:0043531
Pral2322g00003 857 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Pral2322g00003 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 413 IPR027417 -
Pral2322g00003 857 Gene3D - 12 180 IPR035897 -
Pral2322g00003 857 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 181 - -
Pral2322g00003 857 SUPERFAMILY L domain-like 455 825 - -
Pral2322g00003 857 Pfam Leucine Rich Repeat 574 593 IPR011713 -
Pral2322g00003 857 SMART till_3 14 153 IPR000157 GO:0007165
Pral2322g00003 857 Gene3D - 344 423 IPR042197 -
Pral2322g00003 857 Gene3D Ribonuclease Inhibitor 491 681 IPR032675 -
Pral2322g00003 857 PRINTS Disease resistance protein signature 379 393 - -
Pral2322g00003 857 PRINTS Disease resistance protein signature 593 609 - -
Pral2322g00003 857 PRINTS Disease resistance protein signature 214 229 - -
Pral2322g00003 857 PRINTS Disease resistance protein signature 284 298 - -
Pral2322g00003 857 Pfam TIR domain 14 184 IPR000157 GO:0007165
Pral2322g00003 857 Gene3D - 181 339 IPR027417 -
Pral2322g00003 857 Gene3D Ribonuclease Inhibitor 682 844 IPR032675 -
Pral2322g00003 857 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2322g00003 Pral-Chr2322 39105 42454 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2322g00003 15 787 WRKY Transcription Factor Family AT4G12020 29.277 1.25e-81 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2322g00003 - - pcin:129298605 809.29