Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2322g00002 ATGGCTCTTTTTGCTTCTACTTCTTCTTCCCAAGTTCCCTCTGGAAATTATGAAGTTTTCATCAGTTTTAGAGGATCAGACGTCAGATTTGGTTTCCTCAGCCATTTGAAAAACGAGTTGCGTCAAAAGAACATAGATGTCTATGTGGATGACAGGCTGGAAAGAGGAGAAGAAATATCATTAGCACTTGTAGAAGCAATAGAAAGATCCATGATAGCATTGGTGATATTCTCAAAAGATTATGCTTCTTCAAAGTGGTGTTTGGAAGAGCTTGTCAAAATCATAGAATGTAAGGAAGCTGGTCAGCAGATTGTGATACCAATTTTCTACGATGTAGATCCATCAGATGTCAGGCACCAAAGAGGCACTTACGAGGAGGCATTAACTCATCATGAACAGAAACTCAAAGATAACGTGCAAAAGTTGCAAATTTGGAAATCTGTCTTGGAAAAAACTGCAAACTTAGCTGGTTATCATTCATCACATTTTCAGGAAGAATATGAACTGGTCAATGCAATAGTTGAAGGAGTCTTGAGAAAAGTGGAACGTAACGATCCAATTGTGCCAAAATCTGAACTCATTGGATTTCATCAAAATTTCATTAGTGTTGAATCATTAATGGAAATTGAGTCACCAGAAGTTCGAATTCTTGGAATTTGGGGCCCAGGAGGAATAGGCAAAACAACCCTTGCATCAACTATATTTGACAAATTCTCATCCAAATTTCAAAGTCATTGCTTCTTACAAAATGTGAGAGAAGAATCAACAAAGATTGGTGGTTTGAGTCCTTTGTATCAAAAACTTCTTTCTGAGCTATTGGATCAAAAAGATCACATAAATATGAACCGAGCAGTGAGAAGACTGAAACAAAAAAAGGTGTTAATTGTACTTGATGATGTGGACAACCCAGAGCAGCTAAAAGATCTGGCTAGAAAACAACCTTACTTGGGGCGAGGCAGTAGAGTCATTGCAACAAGTAGAGATAAGCATGCTCTTAAGAGTGGAGGGATTCATGAAAAGTATATACATGAAGTCAAGGAGTTAAATGAAGAAGAATCACTTGAGCTTTTCTGTACACATGCCTTCAATCAAAGTCATCCCAATATGGGATATGAAGAGCTATCAAAAAGGACGGTAGCCATTGCTAAAGGCATTCCTCTAGCTTTACAAGTTTTGGGTTCCCATTTTTATGATAGAGATGAAGCATATTGGGAAAGTGAGCTTAGGAAAGTCCAAAACTGTCCCCGTCAGAAAATTCAAGATATATTGAAGGTGAGTTATGATGGATTAGATCCTATAGACAGGAACATATTTTTAGACATTGCATTTTTTTTTTGTGGGACACCAAAAAGATGA 1356 0.3739 MALFASTSSSQVPSGNYEVFISFRGSDVRFGFLSHLKNELRQKNIDVYVDDRLERGEEISLALVEAIERSMIALVIFSKDYASSKWCLEELVKIIECKEAGQQIVIPIFYDVDPSDVRHQRGTYEEALTHHEQKLKDNVQKLQIWKSVLEKTANLAGYHSSHFQEEYELVNAIVEGVLRKVERNDPIVPKSELIGFHQNFISVESLMEIESPEVRILGIWGPGGIGKTTLASTIFDKFSSKFQSHCFLQNVREESTKIGGLSPLYQKLLSELLDQKDHINMNRAVRRLKQKKVLIVLDDVDNPEQLKDLARKQPYLGRGSRVIATSRDKHALKSGGIHEKYIHEVKELNEEESLELFCTHAFNQSHPNMGYEELSKRTVAIAKGIPLALQVLGSHFYDRDEAYWESELRKVQNCPRQKIQDILKVSYDGLDPIDRNIFLDIAFFFCGTPKR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2322g00002 451 Gene3D - 14 186 IPR035897 -
Pral2322g00002 451 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 445 IPR044974 GO:0006952
Pral2322g00002 451 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 183 - -
Pral2322g00002 451 SMART till_3 16 155 IPR000157 GO:0007165
Pral2322g00002 451 Gene3D - 187 340 IPR027417 -
Pral2322g00002 451 Gene3D - 347 431 IPR042197 -
Pral2322g00002 451 FunFam Disease resistance protein (TIR-NBS-LRR class) 349 431 - -
Pral2322g00002 451 PRINTS Disease resistance protein signature 216 231 - -
Pral2322g00002 451 PRINTS Disease resistance protein signature 287 301 - -
Pral2322g00002 451 PRINTS Disease resistance protein signature 382 396 - -
Pral2322g00002 451 Pfam NB-ARC domain 204 427 IPR002182 GO:0043531
Pral2322g00002 451 Pfam TIR domain 16 186 IPR000157 GO:0007165
Pral2322g00002 451 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral2322g00002 451 ProSiteProfiles TIR domain profile. 15 152 IPR000157 GO:0007165
Pral2322g00002 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2322g00002 Pral-Chr2322 6391 8499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2322g00002 14 445 WRKY Transcription Factor Family AT4G12020 29.841 2.73e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2322g00002 - - pcin:129287860 597.43