Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2317g00002 ATGCTTGCCTCAACGGCGCAAGAAGTGCTAACGAATTTGAACATAGTAATCCCAAGAATCCCAAATTTTTTTGCAGCTACCAAGACACCTGTGCCTAATAGTCATGGCTTATATATTTATGCCTTTGCTCAATGTGTTGAGACAGTCTCACAAAGTGGTTGCCAGGATTGCCTTTACCATGCGTTAATCAACTTTCATACTTGTCTTCCCAACTCAAATGCGAGGGCTTATGAAGCTGGTTGTTTCATGAGATACTCCACAAATGCCTTTTTTGCTGATAATCAAACCATTGATATCAACCACTTTTTGAAACAAGGTTCAAGGGATAAAGGGGCTATCATTGGTGAAGTTTTCGGAGGTGCAGCATTTGCTTTTATCCTTCTTGCATTATTTGCTTGGATTAGACTACCAAAAACTACTAAGGCTTCCATAGGAGACATAATTGAAGCAACCAATTTGAATGGTCTGGTTACTTACAACTATAACGAGTTGGAGTATGCAACTAATAATTTTAGGGAACAAAATAAACTAGGAGAGGGTGGATTTGGTGCTGTATATAAGGGAAATTTGAAAAATGGAAAAGTAGTTGCAATCAAGAAATTAAATTTATGCAGCTCAAAAAGGATACAAGAAGATTTTGAAAGTGAAGTGAAGCTTATCAGTAATGTTCATCATCGCAACCTTATCCGACTTTTGGGATGGTGTATTAAAGACTATGATAGAATCCTTGTTTATGAGTACATGGAGAACAACAGTCTTGACAAATTCATATTCGGTAAAAGGAAAGGTTTTCTCAACTGGAAGCAGCGATATGATATAATTCTAGGCATGGCAAGGGGTTTGGCCTATTTACATGAAGAATTACATATTCGTATAGTACATAGAGATATAAAGCCTAATAACATCCTCTTAGATGATGATCTTCAGCCTAAAATTGCTGACTTTGGATTGGCAAGACTTTTACATGAGGAGAAATATCATCTTAGTGCAAACTTTGCAGGAACATTAGGATATGCAGCACCAGAGTATGCAATTCATGGCCAACTATCTGAGAAGGTTGATGTCTACAGCTATGGTGTGGTTGTTTTAGAAATAATCAGTGGTCAAAAAAGTAAGGAATTGAAGGTTAATGATGATGTTGAAGGTGAATTCCTTTTACAAAAGGCTTGGAAACTATATGCAAGTGGCACACCTTTAGAGTTGGTGGACAATACCTTGGAATCCAATGACTATGATGCAGAAGAAGTAAAGAAAATCATAGAAATTGGCCTACTTTGCACCCAAGAATCTGCTACACTTAGACCAACGATGTCTGAAGTAATTGGTTTACTCCAATATAGGGGTTTACTAGAGAGACCATTAATACCTATCTTATTTTGA 1380 0.3703 MLASTAQEVLTNLNIVIPRIPNFFAATKTPVPNSHGLYIYAFAQCVETVSQSGCQDCLYHALINFHTCLPNSNARAYEAGCFMRYSTNAFFADNQTIDINHFLKQGSRDKGAIIGEVFGGAAFAFILLALFAWIRLPKTTKASIGDIIEATNLNGLVTYNYNELEYATNNFREQNKLGEGGFGAVYKGNLKNGKVVAIKKLNLCSSKRIQEDFESEVKLISNVHHRNLIRLLGWCIKDYDRILVYEYMENNSLDKFIFGKRKGFLNWKQRYDIILGMARGLAYLHEELHIRIVHRDIKPNNILLDDDLQPKIADFGLARLLHEEKYHLSANFAGTLGYAAPEYAIHGQLSEKVDVYSYGVVVLEIISGQKSKELKVNDDVEGEFLLQKAWKLYASGTPLELVDNTLESNDYDAEEVKKIIEIGLLCTQESATLRPTMSEVIGLLQYRGLLERPLIPILF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2317g00002 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Pral2317g00002 459 Gene3D Transferase(Phosphotransferase) domain 1 248 448 - -
Pral2317g00002 459 SMART serkin_6 171 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2317g00002 459 Pfam Protein kinase domain 172 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2317g00002 459 Gene3D - 2 90 IPR038408 -
Pral2317g00002 459 ProSitePatterns Protein kinases ATP-binding region signature. 177 200 IPR017441 GO:0005524
Pral2317g00002 459 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 37 445 - -
Pral2317g00002 459 FunFam Cysteine-rich receptor-like protein kinase 2 248 452 - -
Pral2317g00002 459 CDD STKc_IRAK 177 445 - -
Pral2317g00002 459 ProSiteProfiles Protein kinase domain profile. 171 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2317g00002 459 Pfam Salt stress response/antifungal 33 87 IPR002902 -
Pral2317g00002 459 Gene3D Phosphorylase Kinase; domain 1 145 247 - -
Pral2317g00002 459 ProSiteProfiles Gnk2-homologous domain profile. 1 90 IPR002902 -
Pral2317g00002 459 FunFam Cysteine-rich receptor-like protein kinase 2 138 247 - -
Pral2317g00002 459 SUPERFAMILY Protein kinase-like (PK-like) 152 445 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2317g00002 Pral-Chr2317 13408 18708 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2317g00002 40 445 Receptor kinase-like Gene Family AT1G70520 40.941 5.17e-99 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2317g00002 Pkinase 3.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2317g00002 - - qsa:O6P43_014208 561.992