Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2317g00001 ATGACTGCTTTCTCAGGTTCAAGGGATAAAGGGGCTATCATTGGTGAAGTTTTCGGAGGTGCAGCATTTGCTTTTATCCTTCTTGCATTATTTGCTTGGATTAGACTACCAAAAACTACTAAGGCTTCCATAGGAGACATAATTGAAGCAACCAATTTGAATGGTCTGGTTACTTACAACTATAACGAGTTGGAGTATGCAACTAATAATTTTAGGGAACAAAATAAACTAGGAGAGGGTGGATTTGGTGCTGTATATAAGGGAAATTTGAAAAATGGAAAAGTAGTTGCAATCAAGAAATTAAATTTATGCAGCTCAAAAAGGATACAAGAAGATTTTGAAAGTGAAGTGAAGCTTATCAGTAATGTTCATCATCGCAACCTTATCCGACTTTTGGGATGGTGTATTAAAGACTATGATAGAATCCTTGTTTATGAGTACATGGAGAACAACAGTCTTGACAAATTCATATTCGGTAAAAGGAAAGGTTTTCTCAACTGGAAGCAGCGATATGATATAATTCTAGGCATGGCAAGGGGTTTGGCCTATTTACATGAAGAATTACATATTCGTATAGTACATAGAGATATAAAGCCTAATAACATCCTCTTAGATGATGATCTTCAGCCTAAAATTGCTGACTTTGGATTGGCAAGACTTTTACATGAGGAGAAATATCATCTTAGTGCAAACTTTGCAGGAACATTAGGATATGCAGCACCAGAGTATGCAATTCATGGCCAACTATCTGAGAAGGTTGATGTCTACAGCTATGGTGTGGTTGTTTTAGAAATAATCAGTGGTCAAAAAAGTAAGGAATTGAAGGTTAATGATGATGTTGAAGGTGAATTCCTTTTACAAAAGGCTTGGAAACTATATGCAAGTGGCACACCTTTAGAGTTGGTGGACAATACCTTGGAATCCAATGACTATGATGCAGAAGAAGTAAAGAAAATCATAGAAATTGGCCTACTTTGCACCCAAGAATCTGCTACACTTAGACCAACGATGTCTGAAGTAATTGGTTTACTCCAATATAGGGGTTTACTAGAGAGACCATTAATACCTATCTTATTTTGA 1080 0.363 MTAFSGSRDKGAIIGEVFGGAAFAFILLALFAWIRLPKTTKASIGDIIEATNLNGLVTYNYNELEYATNNFREQNKLGEGGFGAVYKGNLKNGKVVAIKKLNLCSSKRIQEDFESEVKLISNVHHRNLIRLLGWCIKDYDRILVYEYMENNSLDKFIFGKRKGFLNWKQRYDIILGMARGLAYLHEELHIRIVHRDIKPNNILLDDDLQPKIADFGLARLLHEEKYHLSANFAGTLGYAAPEYAIHGQLSEKVDVYSYGVVVLEIISGQKSKELKVNDDVEGEFLLQKAWKLYASGTPLELVDNTLESNDYDAEEVKKIIEIGLLCTQESATLRPTMSEVIGLLQYRGLLERPLIPILF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2317g00001 359 SMART serkin_6 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2317g00001 359 FunFam Cysteine-rich receptor-like protein kinase 2 38 147 - -
Pral2317g00001 359 SUPERFAMILY Protein kinase-like (PK-like) 51 345 IPR011009 -
Pral2317g00001 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Pral2317g00001 359 Gene3D Transferase(Phosphotransferase) domain 1 148 348 - -
Pral2317g00001 359 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 345 - -
Pral2317g00001 359 FunFam Cysteine-rich receptor-like protein kinase 2 148 352 - -
Pral2317g00001 359 Gene3D Phosphorylase Kinase; domain 1 45 147 - -
Pral2317g00001 359 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Pral2317g00001 359 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2317g00001 359 CDD STKc_IRAK 77 345 - -
Pral2317g00001 359 Pfam Protein kinase domain 72 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2317g00001 Pral-Chr2317 13408 22064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2317g00001 58 345 Receptor kinase-like Gene Family AT1G56120 50.694 2.76e-95 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2317g00001 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2317g00001 - - pcin:129300016 466.463