Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2316g00002 ATGGGCTCAATGAACTCAAACAACTGGCTATCCTTCCCTCTTTCCCCTACTCAGTCTTCCTTACCTCCACAACTCCAAGCCACTCAATCCCATCAGTTTTCTCTTGGCTTAGTCAATGATTCCATGGAAAACCCTTTCCAAAACCACGATTGGAATCTGATGAATACACACGGAAGCAACGTTAATGAAGTTCCAAAGGTTGCAGATTTTCTAGGAGTGGGGAAGTCTGAGAATCAGTCAGATCTTGCAGCCTTTAATGAAATTCAGTCAAATGATTCGGGTTACCTATTCACAAACAGCAGTCTGGTGCCGATGCAAAGCTCAGTGGTGGCCACATCTGGCAACTTCGAGTATCAAGAAAACAATGCTAACAATAACCTGCAGTCTTTGACATTATCCATGGGTAGTGGTAAGGATTCTACCTGTGAAACCAGTGGCGACAATAGTACTAATACTGCCGTCGAAGCTGCTGCACCCAGAAGAACTTTAGATACATTCGGTCAGCGAACATCAATCTATCGCGGTGTAACCAGACATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGACAATAGTTGTAGAAGGGAAGGGCAATCACGAAAGGGACGCCAAGTCTATTTGGGTGGATATGACAAAGAAGAGAAAGCAGCTAGGGCCTACGATTTAGCGGCACTAAAGTACTGGGGAACATCCACAACTACCAACTTTCCAATCAGTAACTACGAAAAGGAGCTGGAGGAGATGAAGCACATGACAAGACAAGAATTTGTGGCCGCCATACGAAGGAAGAGCAGTGGGTTCTCAAGGGGCGCATCAATGTATCGCGGAGTCACAAGGCATCATCAACATGGTAGATGGCAGGCAAGGATCGGTAGAGTTGCGGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAAGCTGCAGAAGCATACGACATAGCGGCGATCAAGTTCAGAGGACTAAACGCAGTGACAAACTTCGACATGAGCCGTTACGACGTGAAAGCCATACTTGAAAGCAACACGCTTCCAATCGGAGGAGGAGCTGCGAAACGACTGAAGGAAGCTCAGGCTCTGGAATGTTCCAGGAAGAGAGAGGAAATGATAGCGCTCGGATCGAGCTTTCAGTACGGCAGCGGCAGCGGAAGCGGCAGTTCTAGCAGGCTACAACTACAAGCCTACCCACTGATGCAGTTGGATCAGACGCAACCATTGTTAAGCCTGCAGAACCAGGAGATATCTCAGTACCCGTCACTTCATCATCCCAGTTATATCCAAACCCAGCTTCAGCTGCACCATCAAACTGCTTCTTCTAACTATAGCTTTCACCAGTCACCGAGTAATAACGCTCAGTTGTACAATAGCTATCTTCAGAACCACCCGGCTCTGCTTCAGGGTTTGATGAACATGGGTTCTTGTTCTTCTTCTGTGATGGACAATGACGGAGGGTCTAGTGGGAGTTACAGTGGAGGAGGGTATATGGGGATGGCTTCCAACACGACGTCGGGGGGATCCGCGGAGGAGCTGGCGCTGGTGAAGGTTGAAAACTACAACATGCCGTCCAGTGGTTACGGCGGCGGCTGGCCGTCGGAGTCCATGCAGGGATCCAATGCTGCTCTCTTTACTATGTGGAATGAATGA 1653 0.4815 MGSMNSNNWLSFPLSPTQSSLPPQLQATQSHQFSLGLVNDSMENPFQNHDWNLMNTHGSNVNEVPKVADFLGVGKSENQSDLAAFNEIQSNDSGYLFTNSSLVPMQSSVVATSGNFEYQENNANNNLQSLTLSMGSGKDSTCETSGDNSTNTAVEAAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALECSRKREEMIALGSSFQYGSGSGSGSSSRLQLQAYPLMQLDQTQPLLSLQNQEISQYPSLHHPSYIQTQLQLHHQTASSNYSFHQSPSNNAQLYNSYLQNHPALLQGLMNMGSCSSSVMDNDGGSSGSYSGGGYMGMASNTTSGGSAEELALVKVENYNMPSSGYGGGWPSESMQGSNAALFTMWNE 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2316g00002 550 ProSiteProfiles AP2/ERF domain profile. 274 332 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 FunFam AP2-like ethylene-responsive transcription factor 273 334 - -
Pral2316g00002 550 SMART rav1_2 172 244 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 SMART rav1_2 274 338 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 ProSiteProfiles AP2/ERF domain profile. 172 238 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 SUPERFAMILY DNA-binding domain 273 334 IPR016177 GO:0003677
Pral2316g00002 550 PRINTS Ethylene responsive element binding protein signature 173 184 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 PRINTS Ethylene responsive element binding protein signature 314 334 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 CDD AP2 273 334 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 Gene3D AP2/ERF domain 172 240 IPR036955 GO:0003700|GO:0006355
Pral2316g00002 550 Gene3D AP2/ERF domain 274 334 IPR036955 GO:0003700|GO:0006355
Pral2316g00002 550 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 97 427 - -
Pral2316g00002 550 CDD AP2 171 240 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 FunFam AP2-like ethylene-responsive transcription factor ANT 171 240 - -
Pral2316g00002 550 SUPERFAMILY DNA-binding domain 171 240 IPR016177 GO:0003677
Pral2316g00002 550 Pfam AP2 domain 172 230 IPR001471 GO:0003700|GO:0006355
Pral2316g00002 550 Pfam AP2 domain 275 324 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2316g00002 Pral-Chr2316 22852 26156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2316g00002 4 550 AP2-EREBP Transcription Factor Family AT3G20840 65.210 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pral2316g00002 AP2 9.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2316g00002 K09285 - pvy:116115844 796.964