Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2316g00001 ATGGACCATGACAAGACTGGATGTCAAGCTCCTCCGGAAGGTCCTATATTGTGCATCAATAACTGTGGATTTTTTGGAAGTGCTGCCACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGTTGAAACAGGAGCAGGCCAAGCTCGCGGCGTCGTCTATTGGGAATATTATGAATTCATCAAGCGGCAGTGGAAATGAACCTGTTGTTTCTGCAAACGTGAATATCACAGTCAATACACTAGAGCCTAAAACTACATCCGAAGAACCCTTTTTGGGTTCAGGCTTGAAGGAGAATGGTGAGGCAAAGCCGAAGGATGGACCCAAACGCTGCAGCAGCTGCAATAAGCGGGTTGGTTTGACAGGGTTCAGTTGTCGGTGTGGTAACCTGTTCTGTGCTGCACACCGCTACTCAGACAAGCACAATTGTTCCTTCGATTACCGCAGTGCTGAAAGGGATGCCATAGCTAAAGCAAACCCAGTTGTCAAGGCTGAAAAGCTCGATAAGATCTAG 516 0.4709 MDHDKTGCQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAKLAASSIGNIMNSSSGSGNEPVVSANVNITVNTLEPKTTSEEPFLGSGLKENGEAKPKDGPKRCSSCNKRVGLTGFSCRCGNLFCAAHRYSDKHNCSFDYRSAERDAIAKANPVVKAEKLDKI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2316g00001 171 Gene3D - 94 167 IPR035896 -
Pral2316g00001 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 171 - -
Pral2316g00001 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Pral2316g00001 171 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Pral2316g00001 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Pral2316g00001 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Pral2316g00001 171 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Pral2316g00001 171 SUPERFAMILY AN1-like Zinc finger 98 166 IPR035896 -
Pral2316g00001 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Pral2316g00001 171 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Pral2316g00001 171 Gene3D - 4 65 - -
Pral2316g00001 171 MobiDBLite consensus disorder prediction 86 111 - -
Pral2316g00001 171 FunFam Zinc finger AN1-type containing 6 85 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2316g00001 Pral-Chr2316 12995 18352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2316g00001 8 171 C2H2 Transcription Factor Family AT3G52800 44.848 1.17e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2316g00001 - - qsa:O6P43_000126 282.722