Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2315g00007 ATGGCGCTATTTCGTATCTGCGGCCTCCTGTCAACAGCTAACCTCTCCGTAGAACACCATCTTCGCCCGCTCTCTTCTTTCCATAATTCTCCCCATCCTTCCCCCGGCAATCTCTCGTTTTGTTGCTCGCCTTCCTCATTTCATTTTCCACCTCTCTCCCTTACTCACCCCTCACGCGATAAAACCAAAGAAATTTCTCATTTTCTACCAATATTGGCCACCGTATCCCAAGAACAAGCGCTTACTTCCTCTCCTTCAAATGTTTCCGATGACAGCCAACCAACTGAGACACAAGCTGAAGAATTTTCTCGAACCAGGTTGCTTGCTCAGAACCTACCTTGGACTAGCACTCCTGAAGACGTTCGTTCTTTGTTCGAGAGGCATGGAAGAGTCCTAGATGTTGAGCTATCGATGTATAACAAGACGAGAAACAGGGGTTTGGCGTTCGTTGAAATGGGCTCGGAAGAAGAGGCTCTTGCGGCTCTGAATAGTCTCGAATCGTATGAATACGAAGGGCGTATACTGAGACTGGCATATGCTAGGCCGAAAAAGAAGAAAGCTCCACCTCCTGTGCAGCAGAAGACAGTAACATTTAACATATTCGTTGGAAATTTGTCCTATGAAGCAAGGGCTAAAGATCTCAGGGAGTTTTTTGATTCAGGAAGTGGTAGTGTTGTTTCTGCCGAGGTTATATTTCATGACAACCCTAGAAAGTCCGCTGGTTATGGATTTGTATCATTCAAGTCTAAGAGAGAAGCTGAGGCCGCCCTTTCTGAGTTCCAAGGGAAGAATTTTATGGGAAGGCCAATCAGGGTGGCGCGTAGTAAGCAGTTTGTTAAACAACCAGTAGAGGAGAGTGCGAGGTCTGAAGATGAATCTTCTGAGACCAGCGTGAATGGGGTAGAAGCAGATAAAGCTGATTGA 924 0.4632 MALFRICGLLSTANLSVEHHLRPLSSFHNSPHPSPGNLSFCCSPSSFHFPPLSLTHPSRDKTKEISHFLPILATVSQEQALTSSPSNVSDDSQPTETQAEEFSRTRLLAQNLPWTSTPEDVRSLFERHGRVLDVELSMYNKTRNRGLAFVEMGSEEEALAALNSLESYEYEGRILRLAYARPKKKKAPPPVQQKTVTFNIFVGNLSYEARAKDLREFFDSGSGSVVSAEVIFHDNPRKSAGYGFVSFKSKREAEAALSEFQGKNFMGRPIRVARSKQFVKQPVEESARSEDESSETSVNGVEADKAD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2315g00007 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 105 182 IPR000504 GO:0003723
Pral2315g00007 307 SUPERFAMILY RNA-binding domain, RBD 105 275 IPR035979 GO:0003676
Pral2315g00007 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 198 277 IPR000504 GO:0003723
Pral2315g00007 307 Gene3D - 59 185 IPR012677 -
Pral2315g00007 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 200 271 IPR000504 GO:0003723
Pral2315g00007 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 175 IPR000504 GO:0003723
Pral2315g00007 307 Gene3D - 186 292 IPR012677 -
Pral2315g00007 307 MobiDBLite consensus disorder prediction 80 101 - -
Pral2315g00007 307 SMART rrm1_1 106 178 IPR000504 GO:0003723
Pral2315g00007 307 SMART rrm1_1 199 273 IPR000504 GO:0003723
Pral2315g00007 307 PANTHER OS02G0815200 PROTEIN 53 276 - -
Pral2315g00007 307 MobiDBLite consensus disorder prediction 277 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2315g00007 Pral-Chr2315 19329 21573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2315g00007 105 277 Eukaryotic Initiation Factors Gene Family AT3G16380 31.522 2.06e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2315g00007 - - qsa:O6P43_015341 370.548