Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2314g00007 ATGAGGCTGGGGAGAAAGTGGAAGTGCTGCTTTGTGTTGAAAATGGGTGAGAGAAGGGTTCATGAGTTGCTATCTCTGCATCTTCTTCTCAACTTCTTGCTGCTTTCTTTTGCAGCGGAATCAACATCCATGGAAGAAGATATGAACGCCCTAGATTCTCTGAAGAACCTAATGCAAAACTTACCCCAAAGTTGGGAGGGTTCGGATCCTTGCAATGGCTGGGAGGGAATTTCCTGCACTGAGTCGCGTGTCACTTCCATAAAATTAGCAGGCATAGATTTAAATGGCCAGCTTTCTGCGGATATTGGATCGCTCTCTGAATTACGGGCTCTGGATCTCTCTTACAATAAGAACCTAGGAGGACCACTTCCAAGAGAAATCGGAAATTTGAAGAAGCTGGAGGAATTATTTATTGTCGGTTGTGGTTTCACTGGTCCTGTTCCAGATGAAATTGGATCATTACCAGAGCTTGCCTATTTATCTTTAAACTCAAACAGCTTTAGTGGAAGAATTCCAGCTTCCATTGGCAATCTATCAAAACTGCAATGGCTAGACTTAACTGATAATCAACTTGTTGGACCTATCCCTGTATCAAGTGGAGCTACTTCTGGTTTAGACATGCTGCACAATACACTGCACTTTCATCTTGGGAACAACAACATCTCAGGAGCTATTCCTCCGGAACTTTTCAGCTCAAATATGGCACTGATACATTTGATCTTGGATAGCAATAAACTTACTGGCAACATTCCCAATACACTTGGACTTGCTCAAAATCTTACAGTGGTGCGCTTGGAAAATAACTTTTTGACTGGCTCTGTACCTCAGGACCTAACACGCCTCCATAATGTTACAGACCTGATCATGTACAACAATAATCTGTCAGGTCCCATTCCAAACCTAAGTGGAATGACTTCTCTCCAGTACTTGGATATGAGCAACAATGACTTTGACCCATCTGAATTTCCATCGTGGCTTCAAAACTTACCACGTTTGAAATCACTAATAATGGGGAGTACGAATCTTGAAGGGAAGATTCCTGCTGCTTTCTTTAGTCTAGCCGATTTACAGACCGTGGTTCTGAAGGACAATAAACTGAATGGAAGCCTAGAAATTGGCACCAACCACAGCAGACAACTGCAACTGATTGATTTGCAGAATAATCATATTGAGGATTTTAACAAACAATATGAAGCCTTTCGGATCACAATAATACTCGTAGGCAACGCTGCTTGTTATGAAAGAGGTTCTGAAACAAGCACTCTCTGCACCATTCAGGACAAACCACCTTCAGAATTGACGAGGAACTGTTTTCCTGATAAATGCAGTAACCCATATCAGATTTCTAGTCCCAATTGCAAATGCGCATATCCGTATGTTGGAACTTTATCTTATAGAGCTCCTTCTTATATAAACATAACTGCCCTTGAGGAAAATCTTGTGAGAACATTCCAATCCCACCATCTACCTGTGGACTCTGTTTCTTTGATCAAGCCACCTTGCTCTCCATTTCAATGTTTTAAACTCACCGTACAAATCTTCCCTTCAGGCCAAGACCACTTCAATCAAACAATGATATCTGCAATGAGCGTTCTGCTAAGTAGCCTCAGTACAACTGAAGCATATACTTTCATTCTTGGTCTTGATAACTATGGACTTGAAAGTTCAAGGAAATCATCAAACACCAGAATCATAATTGGAGCTGCAGTTGGAGGTTCTGTGTCGCTTGTGCTATTTCTCCTCGCAGGTGTTTATGCCCTTTGCCAAACAAGAAGAGCAGAAAAAGCGATGGAAGAAAGCAATCCATTTGGGAACTGGGATCTAAATGACCGCAGCAGCCCCAGACCTCAGTTACACGGAGCAAAGAGGTTCTCTTTCAAAGAACTTAACGAATACACGAACAATTTTTCACAAGCCAATGAGATTGGATCTGGGGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAGTGGACAACTGGTTGCAATAAAACGAGCTCAGAAACAATCAAATCTAGGGGTACTTCAGTTTAAAGCTGAGATTGAACTCCTTTCAAGAGTCCACCATAAGAATCTGGTTAGCCTTCTGGGATTCTGCTTCGAGAGAGGAGAACAAATGCTTGTTTATGAATTTGTTCCTAATGGAACCTTGAAGGATAGCATCTCAGGGAAGTCCGGCATAAGATTGGACTGGGCTAGAAGGTTAAAAGTAGCCCTTGGTACTGCTAGGGGTTTGGCCTATCTCCATGAACATGCCAATCCTCCTGTTATACATAGAGACATTAAATCAACCAACATTTTGCTGGATGAACGCTTGAATGCAAAAGTTGCCGATTTTGGTCTTTCCAAGCCTATGGACAATTGTGAAAAAGATCACGTCACTACACAAGTTAAAGGAACAATGGGCTACCTGGATCCGGATTATTACACGACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGTTTTGGAGTGCTAATGTTGGAGCTAATAACTGCCAGAAAGCCAATACAAAGAGGGAAACATATTGTGAAAGTATTTCGGAGTACAATTGACAAGACGAAAAACTTGCATGGCCTTCAAGAAATTCTTGACCCAGCTCTTGGCTTAGGCTCTCCATTGAAGGAACTGGAGAATTTTGTTGATCTTGCAATGAACTGTGTTGAGGATTCAGGAGCAGACAGACCGACAATGAGCGATGTGGTGAAAGAAATAGAAAGCATGCTGAAATCTGCTGGTTTGAACTATATGCCTGAATCATCAGCGTCTAATTCAGCTAGCTTTGAGGAGGTAAATAATGTGACTACTTCCTCGCATGTTTGCAACAGTAATGAGTCTTTAGATTCGAGTTCATTATGCAATATTAGAAAGATTGAACCCAAGTAA 2886 0.4168 MRLGRKWKCCFVLKMGERRVHELLSLHLLLNFLLLSFAAESTSMEEDMNALDSLKNLMQNLPQSWEGSDPCNGWEGISCTESRVTSIKLAGIDLNGQLSADIGSLSELRALDLSYNKNLGGPLPREIGNLKKLEELFIVGCGFTGPVPDEIGSLPELAYLSLNSNSFSGRIPASIGNLSKLQWLDLTDNQLVGPIPVSSGATSGLDMLHNTLHFHLGNNNISGAIPPELFSSNMALIHLILDSNKLTGNIPNTLGLAQNLTVVRLENNFLTGSVPQDLTRLHNVTDLIMYNNNLSGPIPNLSGMTSLQYLDMSNNDFDPSEFPSWLQNLPRLKSLIMGSTNLEGKIPAAFFSLADLQTVVLKDNKLNGSLEIGTNHSRQLQLIDLQNNHIEDFNKQYEAFRITIILVGNAACYERGSETSTLCTIQDKPPSELTRNCFPDKCSNPYQISSPNCKCAYPYVGTLSYRAPSYINITALEENLVRTFQSHHLPVDSVSLIKPPCSPFQCFKLTVQIFPSGQDHFNQTMISAMSVLLSSLSTTEAYTFILGLDNYGLESSRKSSNTRIIIGAAVGGSVSLVLFLLAGVYALCQTRRAEKAMEESNPFGNWDLNDRSSPRPQLHGAKRFSFKELNEYTNNFSQANEIGSGGYGKVYRGTLPSGQLVAIKRAQKQSNLGVLQFKAEIELLSRVHHKNLVSLLGFCFERGEQMLVYEFVPNGTLKDSISGKSGIRLDWARRLKVALGTARGLAYLHEHANPPVIHRDIKSTNILLDERLNAKVADFGLSKPMDNCEKDHVTTQVKGTMGYLDPDYYTTQQLTEKSDVYSFGVLMLELITARKPIQRGKHIVKVFRSTIDKTKNLHGLQEILDPALGLGSPLKELENFVDLAMNCVEDSGADRPTMSDVVKEIESMLKSAGLNYMPESSASNSASFEEVNNVTTSSHVCNSNESLDSSSLCNIRKIEPK 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2314g00007 961 Gene3D Ribonuclease Inhibitor 44 203 IPR032675 -
Pral2314g00007 961 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 712 922 - -
Pral2314g00007 961 CDD STKc_IRAK 642 908 - -
Pral2314g00007 961 Gene3D Transferase(Phosphotransferase) domain 1 712 929 - -
Pral2314g00007 961 Gene3D Phosphorylase Kinase; domain 1 606 711 - -
Pral2314g00007 961 FunFam Leucine-rich repeat protein kinase family protein 605 711 - -
Pral2314g00007 961 ProSiteProfiles Protein kinase domain profile. 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2314g00007 961 Pfam Protein kinase domain 637 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2314g00007 961 FunFam Leucine-rich repeat family protein 46 200 - -
Pral2314g00007 961 SUPERFAMILY L domain-like 56 394 - -
Pral2314g00007 961 FunFam Leucine-rich repeat protein kinase family protein 201 300 - -
Pral2314g00007 961 Gene3D Ribonuclease Inhibitor 204 399 IPR032675 -
Pral2314g00007 961 ProSitePatterns Protein kinases ATP-binding region signature. 642 664 IPR017441 GO:0005524
Pral2314g00007 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
Pral2314g00007 961 PANTHER RECEPTOR-LIKE PROTEIN 55 55 909 - -
Pral2314g00007 961 SUPERFAMILY Protein kinase-like (PK-like) 622 931 IPR011009 -
Pral2314g00007 961 SMART serkin_6 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2314g00007 Pral-Chr2314 167609 179521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2314g00007 26 961 Receptor kinase-like Gene Family AT5G49760 51.255 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pral2314g00007 Pkinase 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2314g00007 - - gmx:100810323 1085.86