Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2314g00001 ATGGATCAGCCAACACGATTGTTCTTGTTTTCAATAGCTCTTCTCCAATCCATATCAGGTGTAACCTCAACAAAGTTCACAGTGGTTAACAAATGCAGCTACACAGTGTGGCCAGGCATTGCTCCAAGTCTTAACAATAATCCATTATCAACCACCGGTTTTGTTCTTAAAACTGGTGAGTCCAGGACCATCTCTGTGCCAACTTCTTGGAATGGCCGTTTTTGGGGTCGAACTCAGTGCGCACAAGACTCCACTGGAAGCTTCTCTTGTGTCACCGGTGACTGTGGCTCCGAGAAGCTGGAATGCAAAGGCAGGGCAGGCACACCACCTGCGACATTGATAGAAATTTTTGTTGGCGAATTCCCAGGGCTTGATTTTTATGACGTGAGCTTGCTAGATGGGTTCAATCTTCCTGTAGCGGTTGTTCCTCACGGTGGTTGTGGAGAATGCAAGAGCACATATTGTCTGGCAGATATGATCCAACTATGCCCTTCAGAGCTGAGGGTAATGAGCAAAGACGGAGAAGTGGTGGCGTGCAAGGGCCCTTGTGACGTAGATACAAAAACTTGCGCCCAAAATAGTTCCCAGCCCTCCTCCTATTCAACACTATTCAAGAGCGCTTGCCAACATGCCTATAGCTACCCGCTAGATGATCGTCTAAGCACGTTCACGTGTGAAGGTGCAGATTATAATATCACCTTTTGTGAATCACCCTACGCAAATTGGGACACTTCTGGCTCCTCGTCATGCACGGAAACCATCACAACATCTCATTACATCAAGGATCCAAATACAATAAGCTCCAAAGGGGGTTTGTTCACACTAGGGTTCTTCAGTCCAGAAAATTCCACAAATCGCTATGTGGGAATTTGGTACATGTCCAATTCAACTATTGTATGGGTAGCTAACAGAAATCGACCATTAAGGGATACTTCAGGAATTTTTAAGGTATCTGAAGATGGCAATCTTATCGTATTAGATGGGCAAAACCAAACCATTTGGTCATCAAATGTATCAAATATTTCATCTACTACTAGTTGTCAGATTTTAGATTCTGGAAACCTTGTCCTAACCGATAACTTGACGAAAACCATATGGCAAAGTTTTGAGCATCCTTCAGATACATTGTTGCCAAGCATGAAAATTACAAGCAACGAAAGAGCAGGGGAGAAACAAAAGTTAACAGCATGGAAAAATCAGTCTGATCCATCCCTTGGCAATTTTTCTATGAGCCTAGAACAACTAAATTTTGCAGAACTGTTCATATGGAATGGAACTAGCCCCTATTGGCGTAGTGGTCCATGGAATGGCCAAGGCCTTACAACAGTCCTCAGGATGAGTTCCGAGTATGACAATGGTGCTGACGAGATGGTTGTTAGGTTATCAAATGGGTCTGACATCAAAGAGATGGTTGTTTTGAATGCAAAAGGGAAGTTATTACATAAACAATGGGATGATACTAAGAGGAGATGGCTAGAAACAAATCTTTTTCAAAATTCAGATTGTGATGTCTATGGTATATGTGGGGAATTCGGAATTTGCAATTCAAAGAGCGCACCAATCTGCAGTTGTTTGAGTGGGTTTGAGCCAAGAAATAATGAGGAATGGAATAGACAAAATTGGACTGGTGGTTGTGTCGGGAAATCAACTCAGCGATGTGAGGAAATGAAAAATGGGAGTTTCAATGGAAAGGAAGATACCTTTTTCCATCTGCAAAATGTTAAAGCACCAAACTTTGGAGAACAATCATCTCATTCAGAAGATGAATGTAGAACCCATTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATAATTCAGTGCTTGGCTGTATGACTTGGAAAGAAAATCTAATTGACATACAACAGTTCTCAAATGCAGGAATTGACTTATATATTCGTGCAGCCAAGTCAGACTTTGATAAGAAGAAGCATAGAACATTCATCATTATCATTGTTGTAGTAATAGGAACTATCATTATCAGTGTCACTTGCGCATGCTTCTTATGGAAATGGAAGGCAAAACATTCAGCAGGAAAACGGCATAGCAAACAGGTCTTGTTAAAAAGGGATGGTGCAAATGTAGACAAAACAAGCGGCAATATTATTGGAAAATTGTCACAAGTTAAATTCCAGGAGTTATTGGTCTATGATTTTGAAAAGGTTGCAATGGCTACAAACAACTTTCAATTGACCAATAAACTTGGGCAAGGCGGTTTTGGTCCCGTCTATAAGGGAACACTCCAAGATGGTCAGGATATAGCAGTTAAGAGATTATCAAGAGCATCTGGACAAGGACAAGAGGAATTCATGAATGAGATGATTGTCATTTCCAGGCTTCAACATCGTAATCTCGTAAAACTTTTAGGTTGTTGTATTGAAGGAGAAGAAAAGATGTTGATCTATGAGTACATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCCAGAGAAAAGCAAACTTCTAGACTGGGGAAAGTGCTTTGTCATTATTGAAGGAGTAGCTAGGGGAGTACTTTATCTTCATAGGGACTCTAGACTAAAAATTATACATAGGGACCTAAAGGCAAGTAATATCTTGCTAGATGAGAACTTGATTCCAAAAATATCAGATTTTGGCATGGCTAGAATTTTCAAAGGAAGTGAAGATCAAGCTAACACAAGAAGAGTTGTCGGAACCTATGGCTATATGTCTCCAGAATATGCTATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTTTACTATTAGAGATTATAAGTGGAAGAAGAAACTCAAGCTTTTATAATAATGAGCACTCTCTTAGCCTTCTAGGATTTGCATGGAAATTATGGAATGAAGGAAACATTGTAAAGCTAATAGACCCGAAAACATCTAATCAAAACGTGGAGAAGGATATATTGAGGTGCATACACATAGGACTTCTGTGTGTACAAGACCTTGCAATAGAGAGGCCAGGTATGAGCACTGTAGTTTCTATGCTTAATAGTGAGATTGTCAATCTTCCTCCTCCAAGGCAACCTGCGTTCATCCAATGGCAGAGTATATTGAATCAATTGACCCCAGAAGAGAATCAAAGATTATTTTCTAACAACGAAGTTAGTATTAGTGACATACAAGGCAGATAG 3144 0.4008 MDQPTRLFLFSIALLQSISGVTSTKFTVVNKCSYTVWPGIAPSLNNNPLSTTGFVLKTGESRTISVPTSWNGRFWGRTQCAQDSTGSFSCVTGDCGSEKLECKGRAGTPPATLIEIFVGEFPGLDFYDVSLLDGFNLPVAVVPHGGCGECKSTYCLADMIQLCPSELRVMSKDGEVVACKGPCDVDTKTCAQNSSQPSSYSTLFKSACQHAYSYPLDDRLSTFTCEGADYNITFCESPYANWDTSGSSSCTETITTSHYIKDPNTISSKGGLFTLGFFSPENSTNRYVGIWYMSNSTIVWVANRNRPLRDTSGIFKVSEDGNLIVLDGQNQTIWSSNVSNISSTTSCQILDSGNLVLTDNLTKTIWQSFEHPSDTLLPSMKITSNERAGEKQKLTAWKNQSDPSLGNFSMSLEQLNFAELFIWNGTSPYWRSGPWNGQGLTTVLRMSSEYDNGADEMVVRLSNGSDIKEMVVLNAKGKLLHKQWDDTKRRWLETNLFQNSDCDVYGICGEFGICNSKSAPICSCLSGFEPRNNEEWNRQNWTGGCVGKSTQRCEEMKNGSFNGKEDTFFHLQNVKAPNFGEQSSHSEDECRTHCLENCTCKAYSYNSVLGCMTWKENLIDIQQFSNAGIDLYIRAAKSDFDKKKHRTFIIIIVVVIGTIIISVTCACFLWKWKAKHSAGKRHSKQVLLKRDGANVDKTSGNIIGKLSQVKFQELLVYDFEKVAMATNNFQLTNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASGQGQEEFMNEMIVISRLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDAFIFDPEKSKLLDWGKCFVIIEGVARGVLYLHRDSRLKIIHRDLKASNILLDENLIPKISDFGMARIFKGSEDQANTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRRNSSFYNNEHSLSLLGFAWKLWNEGNIVKLIDPKTSNQNVEKDILRCIHIGLLCVQDLAIERPGMSTVVSMLNSEIVNLPPPRQPAFIQWQSILNQLTPEENQRLFSNNEVSISDIQGR 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2314g00001 1047 ProSiteProfiles PAN/Apple domain profile. 553 636 IPR003609 -
Pral2314g00001 1047 CDD PAN_AP_plant 562 634 - -
Pral2314g00001 1047 CDD STKc_IRAK 735 1001 - -
Pral2314g00001 1047 ProSiteProfiles Thaumatin family profile. 23 235 IPR001938 -
Pral2314g00001 1047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Pral2314g00001 1047 SMART tha2 26 236 IPR001938 -
Pral2314g00001 1047 SUPERFAMILY Hairpin loop containing domain-like 579 632 - -
Pral2314g00001 1047 Pfam S-locus glycoprotein domain 430 531 IPR000858 GO:0048544
Pral2314g00001 1047 ProSiteProfiles Bulb-type lectin domain profile. 251 370 IPR001480 -
Pral2314g00001 1047 SMART serkin_6 729 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2314g00001 1047 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 247 369 - -
Pral2314g00001 1047 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 249 991 - -
Pral2314g00001 1047 Pfam Thaumatin family 30 235 IPR001938 -
Pral2314g00001 1047 Gene3D Transferase(Phosphotransferase) domain 1 805 1006 - -
Pral2314g00001 1047 Gene3D - 246 370 IPR036426 -
Pral2314g00001 1047 ProSiteProfiles Protein kinase domain profile. 729 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2314g00001 1047 Pfam D-mannose binding lectin 297 398 IPR001480 -
Pral2314g00001 1047 FunFam THAUMATIN-LIKE PROTEIN 1 24 236 - -
Pral2314g00001 1047 SMART blect_4 257 372 IPR001480 -
Pral2314g00001 1047 SUPERFAMILY Protein kinase-like (PK-like) 714 1029 IPR011009 -
Pral2314g00001 1047 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Pral2314g00001 1047 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Pral2314g00001 1047 PRINTS Pathogenesis-related protein signature 226 235 IPR001938 -
Pral2314g00001 1047 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Pral2314g00001 1047 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 805 1008 - -
Pral2314g00001 1047 CDD B_lectin 257 372 IPR001480 -
Pral2314g00001 1047 SMART ntp_6 563 635 IPR003609 -
Pral2314g00001 1047 SUPERFAMILY alpha-D-mannose-specific plant lectins 288 437 IPR036426 -
Pral2314g00001 1047 Gene3D Phosphorylase Kinase; domain 1 694 804 - -
Pral2314g00001 1047 FunFam receptor-like serine/threonine-protein kinase SD1-8 704 804 - -
Pral2314g00001 1047 SUPERFAMILY Osmotin, thaumatin-like protein 25 235 IPR037176 -
Pral2314g00001 1047 CDD TLP-PA 25 235 - -
Pral2314g00001 1047 Pfam PAN-like domain 563 621 IPR003609 -
Pral2314g00001 1047 Pfam Protein tyrosine and serine/threonine kinase 730 996 IPR001245 GO:0004672|GO:0006468
Pral2314g00001 1047 Gene3D Thaumatin 24 235 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2314g00001 Pral-Chr2314 42742 47076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2314g00001 713 1016 Receptor kinase-like Gene Family AT4G05200 57.895 6.23e-120 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2314g00001 PK_Tyr_Ser-Thr 6.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2314g00001 - - pcin:129286414 1031.55