Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00113 ATGACAAGCCAAGATTCACAGGGTTTTACATGGCACTACACGGAGCTGGATGACCGAAACCTCGAAATCCGAGGCCGAACATTTTTCTTTGTGGTCGTCCTGTTCTCCATTATCCTTATCATGACCCTTCTTTTCCTTTATGCTCGCTGGATCTGGAGGTACCGGGGCCAACATTCCACCACCTACCATTCCAATGGAGCGCGCCTAGCGCCGCCGGCCCCTCCGGCACAGGGCCTCGACCCCGCTTCGATCAAGGAACTGCCTATAATTTTGCACCAAAGAACTTCGGAGGCCAACAGTAAATTGGAGGAAACAGAGTGCTGTATTTGCCTCGGTACGTTCAAAGACGGGGAGAAATTGAAGGTTTTGCCCGGCTGTGACCATAGCTTCCATTGTGAGTGTGTTGATAAGTGGCTTTCCAATCACTCTAGTTGTCCTCTCTGCAGATCTTCTCTCAAGGTTCATCTTTCCCTTCCCAAGATTTTGATTCAAGAACCACCCAATCGAATCAATCTTCCCTTGTAG 525 0.4952 MTSQDSQGFTWHYTELDDRNLEIRGRTFFFVVVLFSIILIMTLLFLYARWIWRYRGQHSTTYHSNGARLAPPAPPAQGLDPASIKELPIILHQRTSEANSKLEETECCICLGTFKDGEKLKVLPGCDHSFHCECVDKWLSNHSSCPLCRSSLKVHLSLPKILIQEPPNRINLPL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00113 174 SUPERFAMILY RING/U-box 98 158 - -
Pral2313g00113 174 CDD RING-H2_EL5-like 106 149 - -
Pral2313g00113 174 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 27 154 - -
Pral2313g00113 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 155 IPR013083 -
Pral2313g00113 174 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Pral2313g00113 174 Pfam Ring finger domain 106 149 IPR001841 -
Pral2313g00113 174 FunFam RING-H2 finger protein ATL66 71 154 - -
Pral2313g00113 174 SMART ring_2 107 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00113 Pral-Chr2313 520187 521838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00113 4 154 C3H Transcription Factor Family AT3G11110 42.675 1.30e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00113 - - gmx:100803278 244.588