Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2313g00091 | ATGGCCCCTGGCTTCCGAGATCGTACGTCGGAGTTCCGATCTCTCTCTCAAACTCTGAAGAAGGTTGAGGGACTCTCTTTGCCTAATCAAGCTGAAGATGCTCCTTCCACATCGAAACAGTATACTCCCGTGTCCTATTCTAGATCTGAATTCAACAGAAAGGCCTCTCGAATCGGGTTGGGTATCCATGAAACCTCCCAGAAGATTTCGAGGCTTGCTCAATTGGCAAAGAAGTCATCCATGTTTAATGACCCCACTGTGGAAATACAAGAATTAACGGCTGTTATTAAGAATGACATCACGGCATTGAATTCAGCTCTTTCAGATTTGCAAACGATTCAAAACATGGAAACAGCTGATGGAAATTATTCGGACGATAGAATTGTTCATTCAACAGCTGTTTGTGATGACCTAAAGGGTAAACTTATGGGGGCAACTAAGCAGTTTCAAGATGTGCTAACTACTAGGACAGAGAATATCAAAGCTCATGAGAATAGGAAGCAGATATTTTCCAAGAAAGCATCTAGGGACAATCCTTTCCAGCATCGACCAAAGGGAGTGACTGAGCCACCCCCTTGGTCAATTTCATTAAATGCACCTGAAAGTTCGCAGCAAACATCAGCATCCCTTTCAAATGAAGTTACACCGAGCAATCAATTAAGACGGAGGTTAGCTGCTGACAACACTCCATCCCAGCAAATGGAAATGTCTATGATGCAGCAAGTTGTCTCGAGACAAGAAAGTTTTAGTCAGAGTCGTGCTACTGCTCTGCACAGTGTGGAATCTACTATCACAGAACTTAGTGGGATCTTCACTCATTTGGCCACAATGGTTGCTCATCAAGGGGAGTTAGCTATCAGGATTGACGACAACATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAAGCATCTCAGGCAAATATCATCGAATAGGTGGCTTCTGATCAAGATATTTGCTATTCTGATACTTTTTCTGCTAATATTCATGTTCTTCGTGGCCTAA | 1020 | 0.4284 | MAPGFRDRTSEFRSLSQTLKKVEGLSLPNQAEDAPSTSKQYTPVSYSRSEFNRKASRIGLGIHETSQKISRLAQLAKKSSMFNDPTVEIQELTAVIKNDITALNSALSDLQTIQNMETADGNYSDDRIVHSTAVCDDLKGKLMGATKQFQDVLTTRTENIKAHENRKQIFSKKASRDNPFQHRPKGVTEPPPWSISLNAPESSQQTSASLSNEVTPSNQLRRRLAADNTPSQQMEMSMMQQVVSRQESFSQSRATALHSVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLKHLRQISSNRWLLIKIFAILILFLLIFMFFVA | 339 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2313g00091 | 339 | MobiDBLite | consensus disorder prediction | 25 | 46 | - | - | |
Pral2313g00091 | 339 | ProSitePatterns | Syntaxin / epimorphin family signature. | 253 | 292 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Pral2313g00091 | 339 | Gene3D | - | 46 | 302 | - | - | |
Pral2313g00091 | 339 | SUPERFAMILY | t-snare proteins | 47 | 302 | IPR010989 | GO:0016020|GO:0016192 | |
Pral2313g00091 | 339 | CDD | SNARE_syntaxin5 | 250 | 334 | - | - | |
Pral2313g00091 | 339 | SMART | tSNARE_6 | 242 | 309 | IPR000727 | - | |
Pral2313g00091 | 339 | MobiDBLite | consensus disorder prediction | 163 | 183 | - | - | |
Pral2313g00091 | 339 | Pfam | SNARE domain | 284 | 334 | IPR000727 | - | |
Pral2313g00091 | 339 | PANTHER | SYNTAXIN | 49 | 332 | IPR045242 | - | |
Pral2313g00091 | 339 | Pfam | Syntaxin-5 N-terminal, Sly1p-binding domain | 5 | 21 | IPR021538 | - | |
Pral2313g00091 | 339 | MobiDBLite | consensus disorder prediction | 195 | 221 | - | - | |
Pral2313g00091 | 339 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 247 | 309 | IPR000727 | - | |
Pral2313g00091 | 339 | MobiDBLite | consensus disorder prediction | 163 | 221 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2313g00091 | Pral-Chr2313 | 359136 | 362661 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2313g00091 | 1 | 339 | SNARE and Associated Proteins | AT5G05760 | 67.059 | 2.13e-152 | 430 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2313g00091 | K08490 | - | qsa:O6P43_013881 | 473.781 |