Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00091 ATGGCCCCTGGCTTCCGAGATCGTACGTCGGAGTTCCGATCTCTCTCTCAAACTCTGAAGAAGGTTGAGGGACTCTCTTTGCCTAATCAAGCTGAAGATGCTCCTTCCACATCGAAACAGTATACTCCCGTGTCCTATTCTAGATCTGAATTCAACAGAAAGGCCTCTCGAATCGGGTTGGGTATCCATGAAACCTCCCAGAAGATTTCGAGGCTTGCTCAATTGGCAAAGAAGTCATCCATGTTTAATGACCCCACTGTGGAAATACAAGAATTAACGGCTGTTATTAAGAATGACATCACGGCATTGAATTCAGCTCTTTCAGATTTGCAAACGATTCAAAACATGGAAACAGCTGATGGAAATTATTCGGACGATAGAATTGTTCATTCAACAGCTGTTTGTGATGACCTAAAGGGTAAACTTATGGGGGCAACTAAGCAGTTTCAAGATGTGCTAACTACTAGGACAGAGAATATCAAAGCTCATGAGAATAGGAAGCAGATATTTTCCAAGAAAGCATCTAGGGACAATCCTTTCCAGCATCGACCAAAGGGAGTGACTGAGCCACCCCCTTGGTCAATTTCATTAAATGCACCTGAAAGTTCGCAGCAAACATCAGCATCCCTTTCAAATGAAGTTACACCGAGCAATCAATTAAGACGGAGGTTAGCTGCTGACAACACTCCATCCCAGCAAATGGAAATGTCTATGATGCAGCAAGTTGTCTCGAGACAAGAAAGTTTTAGTCAGAGTCGTGCTACTGCTCTGCACAGTGTGGAATCTACTATCACAGAACTTAGTGGGATCTTCACTCATTTGGCCACAATGGTTGCTCATCAAGGGGAGTTAGCTATCAGGATTGACGACAACATGGATGAGTCATTGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAAGCATCTCAGGCAAATATCATCGAATAGGTGGCTTCTGATCAAGATATTTGCTATTCTGATACTTTTTCTGCTAATATTCATGTTCTTCGTGGCCTAA 1020 0.4284 MAPGFRDRTSEFRSLSQTLKKVEGLSLPNQAEDAPSTSKQYTPVSYSRSEFNRKASRIGLGIHETSQKISRLAQLAKKSSMFNDPTVEIQELTAVIKNDITALNSALSDLQTIQNMETADGNYSDDRIVHSTAVCDDLKGKLMGATKQFQDVLTTRTENIKAHENRKQIFSKKASRDNPFQHRPKGVTEPPPWSISLNAPESSQQTSASLSNEVTPSNQLRRRLAADNTPSQQMEMSMMQQVVSRQESFSQSRATALHSVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLKHLRQISSNRWLLIKIFAILILFLLIFMFFVA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00091 339 MobiDBLite consensus disorder prediction 25 46 - -
Pral2313g00091 339 ProSitePatterns Syntaxin / epimorphin family signature. 253 292 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pral2313g00091 339 Gene3D - 46 302 - -
Pral2313g00091 339 SUPERFAMILY t-snare proteins 47 302 IPR010989 GO:0016020|GO:0016192
Pral2313g00091 339 CDD SNARE_syntaxin5 250 334 - -
Pral2313g00091 339 SMART tSNARE_6 242 309 IPR000727 -
Pral2313g00091 339 MobiDBLite consensus disorder prediction 163 183 - -
Pral2313g00091 339 Pfam SNARE domain 284 334 IPR000727 -
Pral2313g00091 339 PANTHER SYNTAXIN 49 332 IPR045242 -
Pral2313g00091 339 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 5 21 IPR021538 -
Pral2313g00091 339 MobiDBLite consensus disorder prediction 195 221 - -
Pral2313g00091 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Pral2313g00091 339 MobiDBLite consensus disorder prediction 163 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00091 Pral-Chr2313 359136 362661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00091 1 339 SNARE and Associated Proteins AT5G05760 67.059 2.13e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00091 K08490 - qsa:O6P43_013881 473.781