Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00086 ATGGAGGGGAAGGAGCAAGACGTCTCGCTGGGAGCTAACAAGTTCTCGGAGAGGCAGCCCATCGGGACGGCAGCTCAGATTCAAGACGGAGGCAAGGACTACCAGGAGCCACCGCCGGCGCCTCTGTTCGAGCCCTCCGAGCTCACGTCGTGGTCCTTCTACAGAGCAGGCATAGCCGAGTTTGTGGCCACTTTTCTCTTCCTCTACATCACCGTCTTGACCGTTATGGGCGTGAAGAACTCCAAGTCCATGTGCTCCACTGTCGGCATTCAGGGGATCGCGTGGGCCTTCGGCGGCATGATCTTCGCCCTCGTCTACTGCACCGCCGGCATCTCAGGCGGTCATATTAACCCGGCGGTGACGTTCGGGCTCCTCCTGGCCAGGAAACTGTCGTTGACGAGAGCACTGTTCTACATGGTGATGCAGTGTCTGGGCGCCATATGCGGGGCCGGTGTGGTTAAGGGTTTCGAGGGCAGCGCCAGATACACCCTCAATGGAGGTGGTGCCAATGGCGTGAACCCTGGCTACACCAAAGGAGATGGCCTCGGCGCTGAGATCGTCGGCACCTTCGTTCTCGTTTACACCGTCTTCTCCGCCACTGACGCCAAACGCAACGCCCGAGATTCCCACGTCCCTCTTTTGGCACCCTTGCCAATTGGGTTTGCTGTGTTCTTGGTGCACCTGGCCACCATCCCAGTCACCGGCACCGGCATCAACCCAGCTCGTAGTCTGGGCGCTGCCATCGTCTTCAACAGCGACAAAGGCTGGGACGATCATTGGGTTTTCTGGGTGGGACCATTCGTGGGAGCAGCTCTTGCGGCTTTGTACCACCAGGTGGTGATCAGAGCCATTCCCTTCAGCTCCACTTAA 870 0.5908 MEGKEQDVSLGANKFSERQPIGTAAQIQDGGKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITVLTVMGVKNSKSMCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRALFYMVMQCLGAICGAGVVKGFEGSARYTLNGGGANGVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHLATIPVTGTGINPARSLGAAIVFNSDKGWDDHWVFWVGPFVGAALAALYHQVVIRAIPFSST 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00086 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 12 284 IPR034294 -
Pral2313g00086 289 MobiDBLite consensus disorder prediction 1 21 - -
Pral2313g00086 289 SUPERFAMILY Aquaporin-like 47 282 IPR023271 -
Pral2313g00086 289 NCBIfam MIP family channel protein 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 FunFam Probable aquaporin PIP1-2 40 289 - -
Pral2313g00086 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2313g00086 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Pral2313g00086 289 Gene3D Glycerol uptake facilitator protein. 40 286 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00086 Pral-Chr2313 341321 342960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00086 1 288 Major Intrinsic Protein MIP AT4G23400 84.028 4.24e-171 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00086 K09872 - cpap:110819219 532.717