Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00085 ATGTCAGGCTTTTGTAGGAGCGGGAGCAGTGGAGGGAGTGGGACGAAGTGCGGGCGTTGGAATCCCACGGCGGAGCAGCTCAAGCTTCTGACTCACCTCTTCACCTCCGGTCTCCGAACCCCAAGCACCGACCAGATCCAAAAGATCTCCTCTCTCCTCAGCTTTTACGGCCACATCGAGAGCAAGAACGTCTTCTATTGGTTCCAGAACCACAAAGCCCGCGAACGCCTCAAACGCCGCAAACTCACTCCCTCTTCTTCACCCAATAATAGTGATGGGAATCAGGTGGCGCCGGAGCCGCAGAGAGTGATGGAGACGCTTCAGCTCTTCCCCGTGGACTCGTTGGGCAGATCAGAAGCGGGGAAGCTGAGGGCACATGCTCATGATTGCAGGGACGATCCCGCCGAACCAATGGAAGCCCCTCCCTTGGATCTCCGCTTGAGTTCTCTGTAA 453 0.5695 MSGFCRSGSSGGSGTKCGRWNPTAEQLKLLTHLFTSGLRTPSTDQIQKISSLLSFYGHIESKNVFYWFQNHKARERLKRRKLTPSSSPNNSDGNQVAPEPQRVMETLQLFPVDSLGRSEAGKLRAHAHDCRDDPAEPMEAPPLDLRLSSL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00085 150 MobiDBLite consensus disorder prediction 120 139 - -
Pral2313g00085 150 MobiDBLite consensus disorder prediction 120 150 - -
Pral2313g00085 150 SMART HOX_1 15 82 IPR001356 GO:0003677
Pral2313g00085 150 Pfam Homeodomain 17 76 IPR001356 GO:0003677
Pral2313g00085 150 MobiDBLite consensus disorder prediction 83 97 - -
Pral2313g00085 150 MobiDBLite consensus disorder prediction 78 100 - -
Pral2313g00085 150 Gene3D - 16 82 - -
Pral2313g00085 150 CDD homeodomain 19 76 IPR001356 GO:0003677
Pral2313g00085 150 SUPERFAMILY Homeodomain-like 18 78 IPR009057 -
Pral2313g00085 150 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 8 85 IPR044555 GO:0003700|GO:0099402
Pral2313g00085 150 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Pral2313g00085 150 FunFam WUSCHEL-related homeobox 11 16 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00085 Pral-Chr2313 335628 336177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00085 6 150 Wox Gene Family AT3G11260 52.326 1.38e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral2313g00085 Homeodomain 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00085 - - pcin:129294115 196.438