Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00084 ATGGCGTCTCCTCGCCCCCCGCCATCGAAGCCCTTGGATCTCGACCTCACCATCGTCTCAGCCAAGCATCTCAAGAACGTCAACTGGAAAAACGGGGATCTCAAGCCCTATGTTGTCTTCTGGGTCGACCCGGACCGTCGTCTCGCCACCAAATCCGATGACTCGGGTTCTACCTGCCCTGTCTGGAACGAACGCTTCACTCTCCCTCTCGCCCACTCTCTCCAAGATTCCTTCCTCACCCTTGAGATTTTCCATTCTAAACCCTCAGAAACGCCCAAGCCCTTAGTCGGCACACTCCGTCTCTCACTCAAGGACGTCGACGACCTGGAAGATTCAACCCGGCTCCGGAAGTTCACTCTCACGCGCCCCTCCGGTCGCCCTCAGGGTAAGATCCATCTGAAGCTCGGTCTTCTTGGACGTCCTCTGCCCCCAACCATAGACTACGCAAACCCTAGCCCTCCATTGGTATGCTATATACCGACAAATCCGATTCCTCCGCCTTCTGCTCGCGATTTCAGGGGATACTCACCTTCGCCGTCTCCTCCACCGTACTCTTCTTACAGCTCGTACCCGGATGCGTACTCTGGGTACTATCCTGGATATTACTCCAGCGCTCCTCCTCCGCCGCCCCCGCCAAGGCCTTTCTTTGATCGTCCGGTGAATTATGGTGGGCCTAGCGGGCCGTCAGCTCCGCTTGATTATTCGTCGTATGATCACAAGCCGAAGAGTGGGAAAATGGGTATGGGTGCGGGGCTTGCAGTGGGCGCTGTTGCTGGTTCTTTGGGTGGGCTTGCTCTTGGGGAGGGTCTGAAATATGAAGAGGAAAAGGTTGCCGAAAAGGTTGAAAATGACATGGCTACCCGGGATGATTATAGCGATTATCGTTATCGAGACTCACTCAACTCAGCGCTGCGCTTGAAGGTCTTGGAACTGCCTCCGCCCATGCCAAAAGGAAAGGAAAGGAAAGGGTTCGTATTCACTATTCAAGAACACCACAGTGACAAAACACCACACACGTGGCGAACAGTAAGGTACAGCACACGAGCCAGCGAAGCCTTGGGTGTGGGAGTGGGGATGTTGAGAACTTCTCTCCTGGGTGGCCCTTCTGTGAAACACGTGGCGCATTCCGAGGCCGTGAGGATGCCACCGGGGCCTGAAGCAGCGGTTGCAAAGGGTACGTGCATGCCCGGTTTGAAGAGGGCCGGAGAGAAGAGCGATGTGGGCGTATGTGGGAAGCCATTCCTGCATAAGAGTTTGAAACTTGACAACATGCCTTCTTCTACACCCGCCCTGGTTTCCAAATGCACCGTTTTCCCTGATCGCAAGTCCACCCTCGGAGACCTCAAGCTCTCCGTCTCCGACCTTCCCATGCTCTCCTGCCACTACATCCAGAAGGGCTGCCTCTTCACCCTTCCTCCCCATCTCCTCCCTTTTCATCCTTTCATCCCTCTCCTCAAGTCCGCTCTCTCTCGCACTCTCTCCTTCTTTCCTCCCCTGGCAGGCCGCTTCAGGACCGATTCCGTTGGCTACGTCTACATCACCTGCAACGATGCCGGCGTCGATTTCCTTCACGCCACTGCCACCGGATTCTTCACCCGCGACCTCCTGGCTCCACCCGATGTCCCCGAATCCTTCAGGCAATTCTTCACTTTTGACAGGAAAGTTAGTTACAGTGGTCATTTCAGCCCGATTTTGGCCGTTCAGGTCACCGAGCTGGCAGACGGTGTTTTCATCGGCTGTTCCGTCAACCACGCCGTTACAGACGGGACCTCCTTCTGGAATTTCTTCAATACTTTCGCCGAAGTCTTCAGAGGAGTCAACAATATTTCCAAGGTGGCGGACTTCCGTCGGGAGTCCGTTCTCATCTCGAAAGCGGTGCTCCATTTCCCAGAAGGCGGGCCGAAGGTCACCTTCAAAGCCGACGGGCCGCTGCGGGAGCGAATTTTCAGCTTTAGCCGCGAGGCAATCCAAAAGCTGAAAGCCAGAACGAATAGCAGGAGATGGACAGGCAACGAAAACGGTGACGTCACCAGCGCCGCAGAGTTGATGGGGAAGCAGAGCAACGATCCTTACCAGAAGGAGAACAGGATAGTAACGTTCAGGCCCGAGAACAGGGTCAAAAGTGCGGACGCTGAAACGGTGGAGATATCGTCGTTTCAGTCGCTTTGCGCACTGCTCTGGCGGGCGGTAACGAGCGCCAGGAAGTTGCCAGCGTCGAAAACGACGACATTCAGAATGGCGGTTAACTGTCGGCACAGGCTAGAACCTAAATTGGATCAGTACTACTTCGGGAATGCGATTCAGAGCATACCGACGTACGCGTCGGCAGGCGACGTGGTGTTGAGGGATTTGCGGTGGTGCGCGGAGCAACTGAACAAGAACGTGAGGGCGCACGACGACGCTACGGTGAGACGGCTCGTAGAGGAGTGGGAGAGGAACCCGAGGTGCTTCCCGCTGGGGAATCCGGACGGTGCATCCATCACCATGGGGAGCTCGCCGAGATTCCCAATGTACGACAATGATTTCGGGTGGGGCAGGCCGGTGGCGGTTCGAAGCGGTGGGGCCAATAAGTTCGACGGGAAGATCTCGGCTTTTCCAGGCAGAGGGGGCAGGGGGAGCGTCGATTTGGAGGTGGTGTTGGCCCCCGAAACCATGGCGGGATTGGAGTCGGACTCAGAGTTCATGCGATACGCGTCGTGCTTGCAGTTACATGCTGTTTGA 2721 0.5612 MASPRPPPSKPLDLDLTIVSAKHLKNVNWKNGDLKPYVVFWVDPDRRLATKSDDSGSTCPVWNERFTLPLAHSLQDSFLTLEIFHSKPSETPKPLVGTLRLSLKDVDDLEDSTRLRKFTLTRPSGRPQGKIHLKLGLLGRPLPPTIDYANPSPPLVCYIPTNPIPPPSARDFRGYSPSPSPPPYSSYSSYPDAYSGYYPGYYSSAPPPPPPPRPFFDRPVNYGGPSGPSAPLDYSSYDHKPKSGKMGMGAGLAVGAVAGSLGGLALGEGLKYEEEKVAEKVENDMATRDDYSDYRYRDSLNSALRLKVLELPPPMPKGKERKGFVFTIQEHHSDKTPHTWRTVRYSTRASEALGVGVGMLRTSLLGGPSVKHVAHSEAVRMPPGPEAAVAKGTCMPGLKRAGEKSDVGVCGKPFLHKSLKLDNMPSSTPALVSKCTVFPDRKSTLGDLKLSVSDLPMLSCHYIQKGCLFTLPPHLLPFHPFIPLLKSALSRTLSFFPPLAGRFRTDSVGYVYITCNDAGVDFLHATATGFFTRDLLAPPDVPESFRQFFTFDRKVSYSGHFSPILAVQVTELADGVFIGCSVNHAVTDGTSFWNFFNTFAEVFRGVNNISKVADFRRESVLISKAVLHFPEGGPKVTFKADGPLRERIFSFSREAIQKLKARTNSRRWTGNENGDVTSAAELMGKQSNDPYQKENRIVTFRPENRVKSADAETVEISSFQSLCALLWRAVTSARKLPASKTTTFRMAVNCRHRLEPKLDQYYFGNAIQSIPTYASAGDVVLRDLRWCAEQLNKNVRAHDDATVRRLVEEWERNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPVAVRSGGANKFDGKISAFPGRGGRGSVDLEVVLAPETMAGLESDSEFMRYASCLQLHAV 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00084 906 Gene3D C2 domain 7 138 IPR035892 -
Pral2313g00084 906 SMART C2_3c 13 115 IPR000008 -
Pral2313g00084 906 Pfam C2 domain 13 109 IPR000008 -
Pral2313g00084 906 Gene3D - 644 894 IPR023213 -
Pral2313g00084 906 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 432 895 - -
Pral2313g00084 906 Pfam Transferase family 433 895 - -
Pral2313g00084 906 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Pral2313g00084 906 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 139 IPR035892 -
Pral2313g00084 906 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Pral2313g00084 906 Gene3D - 430 628 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00084 Pral-Chr2313 315368 327029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00084 484 889 Monolignol Biosynthesis Gene Families AT5G48930 27.791 2.90e-32 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00084 - - gmx:100500612 726.087