Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00061 ATGTCTGAAGGAGACGCTGCCGGCTCTGCCTCTCCCTCTCCTTCCCTCGAACCTCCCCACAATGGCGCCGCCGACTCGGAAGTCGCCGGTTGTTCCGACTTGGAACCCGTCGCGGGCGATGCCGACTTTTCTGGGCTTGGAGACGGAAACGTTGCCGGTAGAGTGAAGGGACCGTGGTCCCCGGAGGAGGATGCCGTTCTCAGTCGATTGGTTAGCAAGTTTGGGGCTAGAAACTGGAGCATGATCGCGAGAGGAATACCCGGCCGCTCCGGCAAGTCTTGCCGTCTCCGTTGGTGTAATCAACTTGACCCTGGTGTTAAACGCAAGCCCTTTACTGAAGAAGAAGATCATATTATAGTTGCAGCCCATGCAATGCATGGAAACAAATGGGCAGCAATAGCTAGGCTTCTTCCAGGAAGAACAGATAATGCTATAAAAAATCACTGGAATTCTACACTTAAGCGCAGGTGCTTGGATCTTGGAAGATGCATACCGCTGGGTGCTGGCATGGTGGAAGAGGGCAGCCAGGACGCCCCTGACAAAATGAAGGCATCTTCTGAAGAAACCATGTCAGCAGGGGATATCAATTCATTGAATCCTACACAAATTAAAAATTTGGGGATGGATGGTGGTATTGATCAGCATGAAGATAATCCTCCAAGAAACGATGGTGCTGAAGTGGAGGAACATCCTACCCTGTGTCAACCAGTAGCACGTGTTAGTGCATTTAGTGTCTATAATCCCCCAAGCAGGGCGACAACTGGATCCGCATATTCAAGGATGCTCCCAATGCAGGGCCCTTTGATTCAATCTTCCAAAGTTGAAGTGGGAGCGTGCAAGCTATTCGAAGATGTTGGCTGTGAGCCCATGGTTCCGGTGCAATGTGGTCATGGCTGCTGTTCTGCAAGTTCTCAGGAAAGCCATTCTCATGATTCGCTACTAGGTCCTGAGTTCATTGACTATTTGGAGCCTCCCTCCTTTTCAAGTCACGAATTGATCTCTATAGCTACAGATTTGAACAACATTGCTTGGATCAAGAGTGGCTTAGATGCCAGAGTAACGGAGAATGCAGTAAACTTAACAGCGTCTCAAGATGTTGCTACTGCATTTCAAAATGGATTCTTTGAAGAGGGAGCAGGCAAGGTTGTGGGTGTGATGCAAGATATGATGTCAACTCAGATGTCTAGCCATCCATTTGCAATGCCTGCAGAGGTTTGA 1218 0.4926 MSEGDAAGSASPSPSLEPPHNGAADSEVAGCSDLEPVAGDADFSGLGDGNVAGRVKGPWSPEEDAVLSRLVSKFGARNWSMIARGIPGRSGKSCRLRWCNQLDPGVKRKPFTEEEDHIIVAAHAMHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCLDLGRCIPLGAGMVEEGSQDAPDKMKASSEETMSAGDINSLNPTQIKNLGMDGGIDQHEDNPPRNDGAEVEEHPTLCQPVARVSAFSVYNPPSRATTGSAYSRMLPMQGPLIQSSKVEVGACKLFEDVGCEPMVPVQCGHGCCSASSQESHSHDSLLGPEFIDYLEPPSFSSHELISIATDLNNIAWIKSGLDARVTENAVNLTASQDVATAFQNGFFEEGAGKVVGVMQDMMSTQMSSHPFAMPAEV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00061 405 ProSiteProfiles Myb-like domain profile. 56 102 IPR001005 -
Pral2313g00061 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 102 IPR017930 -
Pral2313g00061 405 CDD SANT 110 153 IPR001005 -
Pral2313g00061 405 FunFam Transcription factor MYB44 110 156 - -
Pral2313g00061 405 PANTHER MYB PROTEIN-RELATED 56 202 - -
Pral2313g00061 405 SUPERFAMILY Homeodomain-like 53 149 IPR009057 -
Pral2313g00061 405 CDD SANT 58 100 IPR001005 -
Pral2313g00061 405 Pfam Myb-like DNA-binding domain 108 152 IPR001005 -
Pral2313g00061 405 Pfam Myb-like DNA-binding domain 56 102 IPR001005 -
Pral2313g00061 405 FunFam MYB transcription factor 56 107 - -
Pral2313g00061 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 157 IPR017930 -
Pral2313g00061 405 Gene3D - 55 107 - -
Pral2313g00061 405 MobiDBLite consensus disorder prediction 1 36 - -
Pral2313g00061 405 Gene3D - 110 156 - -
Pral2313g00061 405 SMART sant 55 104 IPR001005 -
Pral2313g00061 405 SMART sant 107 155 IPR001005 -
Pral2313g00061 405 ProSiteProfiles Myb-like domain profile. 103 153 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00061 Pral-Chr2313 239981 244484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00061 51 390 MYB Transcription Factor Family AT3G55730 48.725 4.65e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2313g00061 Myb_DNA-binding 6.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00061 K09422 - gmx:100781228 501.13