Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00048 ATGACCACACAAGGGCAGGTCGGGATTGACCATGCTGTGCTCGATGATATAATCAGACGGCTTACAGAAGTCCGATTAGCGAGACCCGGCAAACAGGTTCAGCTCTCTGAGACCGAGATCAGGCAGCTATGTCTTGCTTCTAAAGATATCTTTGTCCAGCAGCCCAATTTGCTCGAACTCGAGGCCCCCATCAAGATTTGTGGTGATATTCATGGACAGTACAGTGATTTATTAAGGCTTTTTGAGTATGGGGGTTTTCCTCCTAGCTCTAACTACCTATTCTTAGGAGACTATGTTGATCGTGGGAAGCAGAGCTTAGAAACCATCTGCCTTTTACTTGCATATAAAATCAAATATCCGGAGAACTTTTTCCTTTTAAGAGGAAATCATGAATGTGCTTCCATTAATAGGATATATGGGTTTTATGATGAATGTAAGAGACGGTTCAATGTGAGGCTTTGGAAGTCTTTTACAGACTGTTTTAACTGCCTTCCCGTGGCAGCCCTTATAGATGACAAAATATTGTGCATGCATGGTGGCCTTTCCCCAGACCTAACAAGCTTGGATCAAATTAGAAATCTATCTCGTCCAACTGTTGTCCCTGATACAGGATTGCTCTGTGATTTGCTTTGGTCAGATCCTGGTAGAGATGTGAAAGGATGGGGTATGAATGACCGAGGAGTTTCATACACCTTTGGCCCGGATAAGGTGGCTGAATTTTTGACAAAGCATGACTTGGACCTGATCTGTCGTGCACATCAGGTTGTTGAGGATGGATATGAATTCTTTGCTGACAGGCAACTTGTTACAATTTTTTCAGCTCCTAACTACTGTGGTGAATTTGACAATGCTGGTGCCATGATGAGCGTGGATGAAAACTTGATGTGCTCTTTCCAGATTCTTAAGCCTGCAGAGAGAAAAACAAAGTTCATGATGTCAAACAAAATGTGA 951 0.429 MTTQGQVGIDHAVLDDIIRRLTEVRLARPGKQVQLSETEIRQLCLASKDIFVQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPSSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKSFTDCFNCLPVAALIDDKILCMHGGLSPDLTSLDQIRNLSRPTVVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAERKTKFMMSNKM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00048 316 Gene3D - 6 314 IPR029052 -
Pral2313g00048 316 CDD MPP_PP1_PPKL 13 303 - -
Pral2313g00048 316 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Pral2313g00048 316 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Pral2313g00048 316 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Pral2313g00048 316 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Pral2313g00048 316 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Pral2313g00048 316 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Pral2313g00048 316 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Pral2313g00048 316 SMART pp2a_7 35 305 IPR006186 GO:0016787
Pral2313g00048 316 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Pral2313g00048 316 SUPERFAMILY Metallo-dependent phosphatases 24 310 IPR029052 -
Pral2313g00048 316 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Pral2313g00048 316 FunFam Serine/threonine-protein phosphatase 61 314 - -
Pral2313g00048 316 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Pral2313g00048 316 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00048 Pral-Chr2313 205631 210652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00048 42 251 Calmodulin-binding Proteins AT5G63870 30.677 6.79e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00048 K06269 - gmx:100811593 617.076