Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00028 ATGAGTTTTGTCTTTCGAGGAAGCAGGGCAGATATTGAAAATGGATTTTCAGGATTTAGACCTGAGAGGCGGATACAGTTGATTTTATTTTTCCTTCAGCATGTTCTTGGAGAGCGACGTCGTAATTCTAGTTCACTCACTTTTCTTGTCACAGTCCTCTTGCTATTTATGGTATTAAACTCTCACCAGATGTCACCAAATTTTCTGCTCTGGCTGGTGCTTGGTGTCTTCTTGACGGCTACATTGTTAAGAATGTATGCAACTTGTCAACAGCTTCAAGCACAGGCCCAAGCTCATGCAGCAGGAGCCAGTGACCTTTTTGACCACTCTGAACTGCGTTTGCACATGCCGCCTTCGATAGCACTGCAAGGTCTCAGACTTCAGCTTGCACTTCTTGATCGGGAGTTTGATGAGATAGATTATGAAACTTTAAGAGCTCTGGATTCAGATTACGTTCCTAGTGCACCTTCCATGACTGAGGAAGAGATCAGTGCTCTTCCCGTCCACAAATACAAGGTTTCTGGTACTAAAGACAGTGATTCCTTAAGTCAACAGGCCTCATCTTCTACATCTCCTGAGAAGAAGCAAGATCCCTCAAATGCAGCTGGGAGCATGAAAGCTCCTGATGATGAGCTGACTTGCAGTGTCTGTCTGGAGCAAGTAAATGTTGGAGATCTGCTCCGTAGCTTGCCTTGCTTGCACCAGCAGTTTCATGCTAATTGCATTGATCCCTGGCTCCGGCAGCAAGGAACATGCCCCATCTGTAAATTTAGAGCTAGATCTGGATGGCAAGAATCTAGAGCTAATGAAGCCAGCAGTACATCAGATTTGGTTTGA 837 0.4504 MSFVFRGSRADIENGFSGFRPERRIQLILFFLQHVLGERRRNSSSLTFLVTVLLLFMVLNSHQMSPNFLLWLVLGVFLTATLLRMYATCQQLQAQAQAHAAGASDLFDHSELRLHMPPSIALQGLRLQLALLDREFDEIDYETLRALDSDYVPSAPSMTEEEISALPVHKYKVSGTKDSDSLSQQASSSTSPEKKQDPSNAAGSMKAPDDELTCSVCLEQVNVGDLLRSLPCLHQQFHANCIDPWLRQQGTCPICKFRARSGWQESRANEASSTSDLV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00028 278 CDD RING-H2_PA-TM-RING 213 256 - -
Pral2313g00028 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 261 IPR013083 -
Pral2313g00028 278 SMART ring_2 214 255 IPR001841 -
Pral2313g00028 278 SUPERFAMILY RING/U-box 209 258 - -
Pral2313g00028 278 ProSiteProfiles Zinc finger RING-type profile. 214 256 IPR001841 -
Pral2313g00028 278 PANTHER TARGET OF ERK KINASE MPK-1 1 262 - -
Pral2313g00028 278 MobiDBLite consensus disorder prediction 177 198 - -
Pral2313g00028 278 Pfam Ring finger domain 213 256 IPR001841 -
Pral2313g00028 278 MobiDBLite consensus disorder prediction 174 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00028 Pral-Chr2313 120809 129192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00028 1 265 C3H Transcription Factor Family AT3G55530 71.324 3.19e-122 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00028 K16283 - gmx:100777936 376.711