Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00017 ATGGGTTGCTGCTTTAGTGCGAGGATCAAAGCTGAGAGCCCTCCTCGCAATGGTTTGATTTCACATGATGGTAACATGAAAGAGGATGGTTTGGGTGGTCTGAGTGGTTTGAGTGACAAGACCCCCGCTCCCTCTGTGCCTCCCACTCCCCGGTCCGAGGGTGTGATCTTGAAGTCCTCCAACATGAAGAACTTCAGCTTTAATGAGCTAAGAACCGCTACAAGGAACTTTCGTCCGGATAGTGTGGTGGGTGAAGGTGGATTTGGCTGCGTATTTAAGGGTTGGATAGATGAGCATACACTTGCACCGATTAAACCAGGGACTGGGCTTGTGATTGCTGTGAAGAGGCTTAGCCAAGAAGGCCTTCAGGGACACGCTGAATGGCTGACAGAAATAAACTACCTGGGGCAGCTACATCATCCTAATCTAGTGAAACTGATTGGTTACTGCTTAGAGGATGACCACCGGATTTTGGTGTACGAATTTTTGGCCAAGGGCAGTTTGGATAATCACTTGTTTAGGAGGGCTTCTTACTTTCAACCACTTTCTTGGAGCATCCGTATGAAGGTTGCTCTTGATGCTGCCAAGGGTCTGGCATTTCTTCACAGTGACCCAGTAAAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGATCAATTCGAACTACAACGCGAAGCTCTCTGATTTTGGGTTGGCAAAGGATGGACCAGCAGGTGACGAGAGCCATGTCTCTACAAGAGTAATGGGAACCTATGGCTATGCTGCACCTGAGTATTTGGCCACAGGCCACTTGACTAAAAGGAGTGATGTGTACAGTTTTGGGGTTGTTCTCCTTGAAATCATATCTGGCAAACGTGCACTGGATAATAACCGGCCATCTGGGGAGCACAATTTAGTTGAATGGGCAAAGCCTCACCTGACCAGCAAACGGCGAATTTTCCAGGTTATGGATGCTCGTATCGAGGGTCAGTACTCACAGCAGGAAGCAATGAAAGTGGCTAGCCTAGCGCTTAAATGCTTGTCCGTAGAACCCAAAATGCGACCAAACATGGAGGAGGTGGTCAGGGCATTGGAACTTTTTCAGGATTCGAGTGACATGGCTACTGTGGGAGGGAGCTCTCAAAATCAGCAATGGTCCTAA 1146 0.4782 MGCCFSARIKAESPPRNGLISHDGNMKEDGLGGLSGLSDKTPAPSVPPTPRSEGVILKSSNMKNFSFNELRTATRNFRPDSVVGEGGFGCVFKGWIDEHTLAPIKPGTGLVIAVKRLSQEGLQGHAEWLTEINYLGQLHHPNLVKLIGYCLEDDHRILVYEFLAKGSLDNHLFRRASYFQPLSWSIRMKVALDAAKGLAFLHSDPVKVIYRDFKTSNILINSNYNAKLSDFGLAKDGPAGDESHVSTRVMGTYGYAAPEYLATGHLTKRSDVYSFGVVLLEIISGKRALDNNRPSGEHNLVEWAKPHLTSKRRIFQVMDARIEGQYSQQEAMKVASLALKCLSVEPKMRPNMEEVVRALELFQDSSDMATVGGSSQNQQWS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00017 381 Gene3D Phosphorylase Kinase; domain 1 53 162 - -
Pral2313g00017 381 ProSitePatterns Protein kinases ATP-binding region signature. 83 115 IPR017441 GO:0005524
Pral2313g00017 381 CDD STKc_IRAK 83 360 - -
Pral2313g00017 381 FunFam Serine/threonine-protein kinase BIK1 45 162 - -
Pral2313g00017 381 Gene3D Transferase(Phosphotransferase) domain 1 163 378 - -
Pral2313g00017 381 MobiDBLite consensus disorder prediction 30 55 - -
Pral2313g00017 381 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2313g00017 381 Pfam Protein tyrosine and serine/threonine kinase 81 359 IPR001245 GO:0004672|GO:0006468
Pral2313g00017 381 PANTHER OS01G0588500 PROTEIN-RELATED 55 363 - -
Pral2313g00017 381 SUPERFAMILY Protein kinase-like (PK-like) 54 362 IPR011009 -
Pral2313g00017 381 FunFam Probable serine/threonine-protein kinase PBL8 163 379 - -
Pral2313g00017 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00017 Pral-Chr2313 67398 71620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00017 63 367 Glycoside Hydrolase AT3G07070 49.186 5.89e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral2313g00017 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00017 - - gmx:100800735 636.721