Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2313g00016 ATGGGTTGCTGCTTTAGTGCGAGGATCAAAGCTGAGAGCCCTCCTCGCAATGGTTTGATTTCACATGATGGTAACATGAAAGAGGATGGTTTGGGTGGTCTGAGTGGTTTGAGTGACAAGACCCCCGCTCCCTCTGTGCCTCCCACTCCCCGGTCCGAGGGTGTGATCTTGAAGTCCTCCAACATGAAGAACTTCAGCTTTAATGAGCTAAGAACCGCTACAAGGAACTTTCGTCCGGATAGTGTGGTGGGTGAAGGTGGATTTGGCTGCGTATTTAAGGGTTGGATAGATGAGCATACACTTGCACCGATTAAACCAGGGACTGGGCTTGTGATTGCTGTGAAGAGGCTTAGCCAAGAAGGCCTTCAGGGACACGCTGAATGGCTGACAGAAATAAACTACCTGGGGCAGCTACATCATCCTAATCTAGTGAAACTGATTGGTTACTGCTTAGAGGATGACCACCGGATTTTGGTGTACGAATTTTTGGCCAAGGGCAGTTTGGATAATCACTTGTTTAGGAGGGCTTCTTACTTTCAACCACTTTCTTGGAGCATCCGTATGAAGGTTGCTCTTGATGCTGCCAAGGGTCTGGCATTTCTTCACAGTGACCCAGTAAAAGTGATATATCGAGACTTCAAAACTTCTAACATCTTGATCAATTCGAACTACAACGCGAAGCTCTCTGATTTTGGGTTGGCAAAGGATGGACCAGCAGGTGACGAGAGCCATGTCTCTACAAGAGTAATGGGAACCTATGGCTATGCTGCACCTGAGTATTTGGCCACAGTTTTGGGGTTGTTCTCCTTGAAATCATATCTGGCAAACGTGCACTGGATAATAACCGGCCATCTGGGGAGCACAATTTAG 870 0.4747 MGCCFSARIKAESPPRNGLISHDGNMKEDGLGGLSGLSDKTPAPSVPPTPRSEGVILKSSNMKNFSFNELRTATRNFRPDSVVGEGGFGCVFKGWIDEHTLAPIKPGTGLVIAVKRLSQEGLQGHAEWLTEINYLGQLHHPNLVKLIGYCLEDDHRILVYEFLAKGSLDNHLFRRASYFQPLSWSIRMKVALDAAKGLAFLHSDPVKVIYRDFKTSNILINSNYNAKLSDFGLAKDGPAGDESHVSTRVMGTYGYAAPEYLATVLGLFSLKSYLANVHWIITGHLGSTI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2313g00016 289 ProSitePatterns Protein kinases ATP-binding region signature. 83 115 IPR017441 GO:0005524
Pral2313g00016 289 Gene3D Phosphorylase Kinase; domain 1 53 162 - -
Pral2313g00016 289 Gene3D Transferase(Phosphotransferase) domain 1 163 272 - -
Pral2313g00016 289 MobiDBLite consensus disorder prediction 30 55 - -
Pral2313g00016 289 SUPERFAMILY Protein kinase-like (PK-like) 48 269 IPR011009 -
Pral2313g00016 289 FunFam Serine/threonine-protein kinase BIK1 45 162 - -
Pral2313g00016 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Pral2313g00016 289 Pfam Protein tyrosine and serine/threonine kinase 81 264 IPR001245 GO:0004672|GO:0006468
Pral2313g00016 289 ProSiteProfiles Protein kinase domain profile. 77 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2313g00016 289 PANTHER OS01G0588500 PROTEIN-RELATED 55 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2313g00016 Pral-Chr2313 67395 71306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2313g00016 63 272 Glycoside Hydrolase AT3G07070 51.887 1.75e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral2313g00016 PK_Tyr_Ser-Thr 7.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2313g00016 - - gmx:100800735 460.299