Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2311g00005 ATGAAGTGGGAAATGGATATTCTCTCATCTTCTTCTCATATCTCAAATCCCACTTGGCTCATTCAAGACGCCATGAACACAACAAAATGGACTCCTTCAGAGAACAAACTGTTTGAGAATGCTCTGGCAGTGTATGATAAAGACACACCAGATCGGTGGGTGAAAGTTGCTGCAATGATACCTGGGAAGACAGTAGGAGATGTGATTAAGCAGTACAGAGAATTAGTAGAAGATGTTAGTAACATAGAAGCTGGATTGATCCCAATTCCAGGTTATAACAGTAGCACCACAACCTCACAATTCACCTTAGACTGGGTTAACTCTTCTGGATTTGATAACTTCAAATCACATGGTGGAAAGAGATCCTCATCAGGGAGACCCCCTGAACAAGAAAGAAAGAAAGGTGTCCCATGGACAGAAGAAGAACATAAACTGTTTCTTCTGGGTTTGAAGAAGTATGGGAAAGGAGATTGGAGGAACATATCGCGCAATTTCGTGGGGACTCGAACACCAACTCAGGTGGCTAGCCATGCTCAGAAGTACTTCATAAGGCAGCTTTCAGGGGGGAAAGACAAGAGAAGAGCAAGCATTCATGATATAACAACAGTGAATCTGTCAGAAACCACAAGAACACCTTCTTGTTCATCTTTAGAAGACAACAAAAATAACAGCAGCAAAAATGGATGTAACACAAAGCAGGAGGCAAATCCGAGTACTACTTTAGGTCAAGCACATTTTCAATGGAACCAGGCAAATTCAGGAGGAGGAACTATGGGGTTTAATCCTTATGGGGTTAACTCTTATGGGATGAAAATGCAGGGTCAAAATCTGCATAGAAGTGATCTTTTTAATAATCATGATTCTTCCTACTTTGGACCTCAAACTCAGAACATGGTTTTCCCAATGCATTCTTCTGCTCACTACTTTTCTCATGCTTTATAG 942 0.4119 MKWEMDILSSSSHISNPTWLIQDAMNTTKWTPSENKLFENALAVYDKDTPDRWVKVAAMIPGKTVGDVIKQYRELVEDVSNIEAGLIPIPGYNSSTTTSQFTLDWVNSSGFDNFKSHGGKRSSSGRPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVGTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLSETTRTPSCSSLEDNKNNSSKNGCNTKQEANPSTTLGQAHFQWNQANSGGGTMGFNPYGVNSYGMKMQGQNLHRSDLFNNHDSSYFGPQTQNMVFPMHSSAHYFSHAL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2311g00005 313 CDD SANT 137 182 IPR001005 -
Pral2311g00005 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 186 IPR017930 -
Pral2311g00005 313 SUPERFAMILY Homeodomain-like 131 185 IPR009057 -
Pral2311g00005 313 SMART sant 26 78 IPR001005 -
Pral2311g00005 313 SMART sant 134 184 IPR001005 -
Pral2311g00005 313 MobiDBLite consensus disorder prediction 208 238 - -
Pral2311g00005 313 ProSiteProfiles SANT domain profile. 138 186 IPR017884 -
Pral2311g00005 313 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 25 285 IPR043363 -
Pral2311g00005 313 MobiDBLite consensus disorder prediction 122 138 - -
Pral2311g00005 313 ProSiteProfiles Myb-like domain profile. 22 76 IPR001005 -
Pral2311g00005 313 Gene3D - 24 89 - -
Pral2311g00005 313 ProSiteProfiles Myb-like domain profile. 130 182 IPR001005 -
Pral2311g00005 313 Gene3D - 136 186 - -
Pral2311g00005 313 FunFam Transcription factor SRM1 22 89 - -
Pral2311g00005 313 CDD SANT 29 76 IPR001005 -
Pral2311g00005 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 133 185 IPR006447 GO:0003677
Pral2311g00005 313 FunFam transcription factor MYB1R1 136 187 - -
Pral2311g00005 313 MobiDBLite consensus disorder prediction 116 138 - -
Pral2311g00005 313 Pfam Myb-like DNA-binding domain 137 182 IPR001005 -
Pral2311g00005 313 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Pral2311g00005 313 SUPERFAMILY Homeodomain-like 28 83 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2311g00005 Pral-Chr2311 48301 49799 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2311g00005 Myb_DNA-binding 6.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2311g00005 - - gmx:100784163 399.053