Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2304g00054 ATGAAAGGTTTCTGGGTTTCGTTCGCTTACTTGGTTTCTGCAATTTTTCTTGTTCTGCTTGCTCACATTTCAACTGCACAGCTAACAGCAAGTGAGAGTAGAATTCTATTCCAAGTTCAGAAAATTCTTGAATATCCTCAGGTTCTTCAAGGATGGAACAACTGGACCAATTTCTGCTATCTTCCTTATTCACCTTCTCTCCAGATTGTCTGCTCTAACGGTCATGTAACAGAATTAACAATCATTGGAAACCAAACCTCTCCTTCCATTCATATTCTTTCTGAAAGATTTTCCATTGATTCTTTCTTCACTGTCTTGACAAAGCTTTCAAATTTGAAGGTACTTTCACTAGTGTCCTTGGGTTTGTGGGGTCCTTTACCAGACAAGATCAACAGGTTCAGCTCTCTTCAAGTTCTGAACTTGAGCTCAAATTCCATTCATGGGGAGATCTCACCATCAATCTCTTCCATGAAAAGTCTCAGGAGTCTGCTTTTGGATGGTAATTTGTTCAAAGGAACTGTCCCAGATCTTAAAAGACTAACTTCTCTTGAAGAACTCGATCTGGGAAACAACAAACTAGGTCCTGAGTTCCCTTCATTAGGTAATAATCTTGTTAGTTTAGTATTGAGAAACAATTCTCTGAGGTCTAAACTTCCTTCGAAGTTTAATCAGTTTGACAAGCTTCAAAAAATTGATATTTCCTCCAATGAAGTTTCTGGAAACATCCCATCTGCTCTGTTCTCTCTGCCTTCCATTCAGTATGTGAACCTTGCAGACAACAAACTAAGCGGTTCCCTTTCAGTGAACATTAGATGTGGTTCTTCTCTGACCTTCGCTGATATTTCAAACAATCTTTTGGTGGGAAGATTGCCGTCCTGCATTGGGTCAAACTTAAAGTCCTCAAATCGCACGGTTTTGTATTCTGGGAATTGCTTATCCATAAGAGGCTCAAAAGATCAACACCCAACTTCATATTGCAAGAAAGAGGAAGCTTTAGCCACTAAACCTCTTGAAGGAAGCCAGAAAAAGTCAGGTATGAAATTAGGCTTGATACTTGGTATAATTGGAGGGTCTGTAGTAATTTCAATGCTTTTAGCTCTGATCATTCTTCTCATCTTGAGGAAGACCAAAGCAGAAAGAGCTGATAATTACCTAGACAGATCTGTTACTGATAAATCCCCTGGTCATGCGTTCCCAAGACCAAATACTGATACAAGACGAGTTCCACAGACTACGAGGCTGGCAGCGATTGGACTTCCACCATACAGAATCTTCACAGCAGATGAAATAGAGGAGGCAACAAACAATTTTGACCCATCAAATCTTATGAGAGAAGGATCAGAGGGACAGCAATATAAAGGTTGGATCAGAGACGGGTCTGTGGTCCTGATTAACTGTGTAAAGCTAACGCACAAGAATGTGACCCAAAACCACATTGAGGTGTTGTCCAATTTAAGGCATAGGCATTTGGTAAGCGTTATTGGACACTGCCTAGTAGCCTCTCAAGACCATCATCAGACAACAAGCACACTCGTTCTTGTTTGTGAGCAATTCTCAAATGGGTCATTGAGGGATCATTTAACAGATTGGAGAAAAAAGGAAGTGCTGAAATGGCCACAAAGAATGGCGATCACCATAGGAATTGCAAGGGGAATCCAGTTCTTACATACAGGGCTTGTTCCTGGTATATATGGCAATAACATAAAGATTGAGAAAATCCTTTTGGATGATAGTCTCAGTGCAAAAGTTAGTGGATATAACATTCCATTGCTATTCAATGAAATTGACAGCGCTGACAATACCGCAGAAAAGGAAGATATATATCAGTTTGGTGTTATTCTACTGGAAGTTATAACTGGCAAATCAATTACTTCTGTCAATGAAGTAGAGGAACTGAAAGATGAGCTGGAGAGAAGCTTATCAGAAGCCGCATCAGTACTTAGAGGAGTGACTGATCCTTCAATCAGGGGAAGTTATGCGTACGAATCCATGAGAACCACAGTTCAGATTACCATAAGTTGCCTCAATAAAGTTCCTAGCACGCGTCCTTCAATAGAAGATGTTCTCTGGAATTTGCAGTACTCAATTCAGGTCCAAGAGAACTGGACCAGCAGTGGAAATCTCGGACTCGGTACCAGATTTTAG 2145 0.4047 MKGFWVSFAYLVSAIFLVLLAHISTAQLTASESRILFQVQKILEYPQVLQGWNNWTNFCYLPYSPSLQIVCSNGHVTELTIIGNQTSPSIHILSERFSIDSFFTVLTKLSNLKVLSLVSLGLWGPLPDKINRFSSLQVLNLSSNSIHGEISPSISSMKSLRSLLLDGNLFKGTVPDLKRLTSLEELDLGNNKLGPEFPSLGNNLVSLVLRNNSLRSKLPSKFNQFDKLQKIDISSNEVSGNIPSALFSLPSIQYVNLADNKLSGSLSVNIRCGSSLTFADISNNLLVGRLPSCIGSNLKSSNRTVLYSGNCLSIRGSKDQHPTSYCKKEEALATKPLEGSQKKSGMKLGLILGIIGGSVVISMLLALIILLILRKTKAERADNYLDRSVTDKSPGHAFPRPNTDTRRVPQTTRLAAIGLPPYRIFTADEIEEATNNFDPSNLMREGSEGQQYKGWIRDGSVVLINCVKLTHKNVTQNHIEVLSNLRHRHLVSVIGHCLVASQDHHQTTSTLVLVCEQFSNGSLRDHLTDWRKKEVLKWPQRMAITIGIARGIQFLHTGLVPGIYGNNIKIEKILLDDSLSAKVSGYNIPLLFNEIDSADNTAEKEDIYQFGVILLEVITGKSITSVNEVEELKDELERSLSEAASVLRGVTDPSIRGSYAYESMRTTVQITISCLNKVPSTRPSIEDVLWNLQYSIQVQENWTSSGNLGLGTRF 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2304g00054 714 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 518 707 - -
Pral2304g00054 714 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 202 - -
Pral2304g00054 714 Gene3D Ribonuclease Inhibitor 29 338 IPR032675 -
Pral2304g00054 714 SUPERFAMILY L domain-like 43 307 - -
Pral2304g00054 714 Gene3D Transferase(Phosphotransferase) domain 1 518 706 - -
Pral2304g00054 714 SUPERFAMILY Protein kinase-like (PK-like) 417 692 IPR011009 -
Pral2304g00054 714 Pfam Protein tyrosine and serine/threonine kinase 472 584 IPR001245 GO:0004672|GO:0006468
Pral2304g00054 714 Gene3D Phosphorylase Kinase; domain 1 410 512 - -
Pral2304g00054 714 Pfam Leucine rich repeat 203 262 IPR001611 GO:0005515
Pral2304g00054 714 Coils Coil 626 646 - -
Pral2304g00054 714 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 202 693 - -
Pral2304g00054 714 ProSiteProfiles Protein kinase domain profile. 437 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2304g00054 714 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 204 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2304g00054 Pral-Chr2304 312937 316282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2304g00054 45 707 Miscellaneous Gene Families AT3G03770 41.001 1.23e-179 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pral2304g00054 PK_Tyr_Ser-Thr 2.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2304g00054 - - gmx:100803061 854.744