Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2304g00050 | ATGTTGCAGCTTCACTGTCTGTCTTCTTCTTCCTCACTCACAACTCATTATTCCATTCAACTCTGCCCTCCCCATAGTTTCTATCCCAAAAAGTCCCTTTCTTTTTGCCGTTCTTCCACGTCCAGTGGCTCCAACTTCTCCCTCAACCTCCCTTCCTCCCGCATAAACCCATTTTCTATCAAATGCCGCCAATCCGAGTACTTCGAACAACAAAGCTTCACCAGACCCACAAGAAATGCAAACGGAAGTGATGCTGTTGGAGCTCTGCCGCCTAGGGTTTATGTGGGTCACTCGGTTTACAAAGGGAAAGCTGCGCTTACGGTGACTCCCAGGCCTCCAGAGTTTGCGTCATTGGATTCAGGGGCATTCAAAGTATCTCGGGAGGGTTATGTACTGCTTCAGTTTGCTCCTGCAGTTGGTATGCGCCAGTATGACTGGAACAGGAAGCAGGTATTCTCTCTATCGGTGGGTGAAATGGGAAATGTAATTAGCCTTGGTACAAGGGATTCGTGTGAATTCTTTCATGATCCTTTCAAGGGGAGGAGTGATGAAGGTAAAATCAGAAAAGTTTTGAAGGTGGAGCCACTTCCAGATGGTTCTGGTCACTTTTTTAACCTAAGTGTTCAAAACAAGATTGAGAACGTGGATGAAAGCATCTATATCCCTGTTACAAAAGCTGAGCTAACAGTTTTCAACTCAATTTTCAATTTTATCATGCCATACCTTCTGGGCTGGCATGCGTTTGCAAATTCTATAAAACCAGATGATCAAAGCCGACTGAATAACGCCAATCCAAGATATGGAGGAGACTATGAATGGAGCAGATAG | 828 | 0.4505 | MLQLHCLSSSSSLTTHYSIQLCPPHSFYPKKSLSFCRSSTSSGSNFSLNLPSSRINPFSIKCRQSEYFEQQSFTRPTRNANGSDAVGALPPRVYVGHSVYKGKAALTVTPRPPEFASLDSGAFKVSREGYVLLQFAPAVGMRQYDWNRKQVFSLSVGEMGNVISLGTRDSCEFFHDPFKGRSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKIENVDESIYIPVTKAELTVFNSIFNFIMPYLLGWHAFANSIKPDDQSRLNNANPRYGGDYEWSR | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2304g00050 | 275 | Pfam | Whirly transcription factor | 99 | 233 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Pral2304g00050 | 275 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL | 55 | 275 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Pral2304g00050 | 275 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 91 | 275 | IPR009044 | GO:0003677|GO:0006355 | |
Pral2304g00050 | 275 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 86 | 263 | IPR009044 | GO:0003677|GO:0006355 | |
Pral2304g00050 | 275 | FunFam | Single-stranded DNA-binding protein WHY2, mitochondrial | 84 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2304g00050 | Pral-Chr2304 | 297981 | 301607 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2304g00050 | 46 | 275 | Whirly Transcription Factor Family | AT1G14410 | 66.957 | 1.20e-119 | 341 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Whirly | Pral2304g00050 | Whirly | 1.1e-60 | CL0609 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2304g00050 | K26559 | - | pcin:129310571 | 477.248 |