Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2304g00050 ATGTTGCAGCTTCACTGTCTGTCTTCTTCTTCCTCACTCACAACTCATTATTCCATTCAACTCTGCCCTCCCCATAGTTTCTATCCCAAAAAGTCCCTTTCTTTTTGCCGTTCTTCCACGTCCAGTGGCTCCAACTTCTCCCTCAACCTCCCTTCCTCCCGCATAAACCCATTTTCTATCAAATGCCGCCAATCCGAGTACTTCGAACAACAAAGCTTCACCAGACCCACAAGAAATGCAAACGGAAGTGATGCTGTTGGAGCTCTGCCGCCTAGGGTTTATGTGGGTCACTCGGTTTACAAAGGGAAAGCTGCGCTTACGGTGACTCCCAGGCCTCCAGAGTTTGCGTCATTGGATTCAGGGGCATTCAAAGTATCTCGGGAGGGTTATGTACTGCTTCAGTTTGCTCCTGCAGTTGGTATGCGCCAGTATGACTGGAACAGGAAGCAGGTATTCTCTCTATCGGTGGGTGAAATGGGAAATGTAATTAGCCTTGGTACAAGGGATTCGTGTGAATTCTTTCATGATCCTTTCAAGGGGAGGAGTGATGAAGGTAAAATCAGAAAAGTTTTGAAGGTGGAGCCACTTCCAGATGGTTCTGGTCACTTTTTTAACCTAAGTGTTCAAAACAAGATTGAGAACGTGGATGAAAGCATCTATATCCCTGTTACAAAAGCTGAGCTAACAGTTTTCAACTCAATTTTCAATTTTATCATGCCATACCTTCTGGGCTGGCATGCGTTTGCAAATTCTATAAAACCAGATGATCAAAGCCGACTGAATAACGCCAATCCAAGATATGGAGGAGACTATGAATGGAGCAGATAG 828 0.4505 MLQLHCLSSSSSLTTHYSIQLCPPHSFYPKKSLSFCRSSTSSGSNFSLNLPSSRINPFSIKCRQSEYFEQQSFTRPTRNANGSDAVGALPPRVYVGHSVYKGKAALTVTPRPPEFASLDSGAFKVSREGYVLLQFAPAVGMRQYDWNRKQVFSLSVGEMGNVISLGTRDSCEFFHDPFKGRSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKIENVDESIYIPVTKAELTVFNSIFNFIMPYLLGWHAFANSIKPDDQSRLNNANPRYGGDYEWSR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2304g00050 275 Pfam Whirly transcription factor 99 233 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pral2304g00050 275 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 55 275 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pral2304g00050 275 SUPERFAMILY ssDNA-binding transcriptional regulator domain 91 275 IPR009044 GO:0003677|GO:0006355
Pral2304g00050 275 Gene3D Transcriptional Coactivator Pc4; Chain A 86 263 IPR009044 GO:0003677|GO:0006355
Pral2304g00050 275 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 84 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2304g00050 Pral-Chr2304 297981 301607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2304g00050 46 275 Whirly Transcription Factor Family AT1G14410 66.957 1.20e-119 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Pral2304g00050 Whirly 1.1e-60 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2304g00050 K26559 - pcin:129310571 477.248