Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2304g00038 ATGGGGTTGGGTGCTGATAATGGTAAGGTGGAGTCTTGGGATGTCAGCAAATCAAAGGGGAAGAAGAAGAAGAAGAAAGATGACGGCGTTGTGGAAGAGGAAGAAACTGGGTGTTGGGCTGGGCTGAGGTTCATTGGCAGTTGCATTTCTTCGAGATCCAAGGTTGATAGCTCAGTCAGCAGCATCAGTACTCATTACGGTAGAGATCAACCAACAGCTCCAGTAGTCTCTTCTACAACCACAAGTAACGCGGAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAACTTAAAGTTGCTTCCAGGCTTCGAAAGTTCTCATTTAATGATCTTAAGCTGGCAACAAGAAACTTCCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACAGTTGCTGTAAAAACCCTCAATCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAGTTTTCTTGGTGATCTAATTCATCCCAACCTCGTTAAACTTATAGGCTACTCTATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTCGGGGAAGCCTGGAGAACCACCTATTTAGGAGATCCCTGCCGCTTCCGTGGTCCATCAGAATGAAAATTGCACTAGGAGCTGCGAAGGGTCTGGCATTTCTTCATGAGGAAGCTGAGCGACCAGTAATATATAGGGATTTTAAAACTTCCAACATACTGTTGGATGCTGAGTACAATGCCAAACTTTCGGATTTTGGACTTGCCAAAGATGGTCCGGAGGGTGATAAAACCCATGTATCTACTCGGGTGATGGGAACCTATGGTTATGCAGCGCCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTTGTTCTTCTTGAGATGTTGACTGGCAGAAGATCGATGGACAAAAACCGACCCAATGGTGAACATAACCTTGTCGAATGGGCTCGGCCACATCTGGGAGAGAGAAGAAGGTTCTATAGGTTGATAGATCCTCGGTTAGAAGGTCACTTTTCTATAAAAGGAGCTCAAAAAGCTGCCCAACTGGCTGCTCACTGCCTCAGCAGAGATCCAAAAGCCAGACCCCTAATGAGCGAAGTCGTGGAAGCTTTAAAGCCCCTGCCAAACCTCAAGGACATGGCGAGCTCATCATATTATTTTCAGACAATGCAAGCTGACAGATTTGGTGCCAGCCCTAATACTCGAAATGGGCGAACACAAGGAGGATTGCTTACCCGGCATGGGCAGCAGCAGAGGAGTCTCTCTATTCCTCATGGATCTCATGCATCTCCTTATCACCACCAGTTTCCCTTACAATCCCCTAAACCTAATGGCAAAGCATAG 1425 0.4589 MGLGADNGKVESWDVSKSKGKKKKKKDDGVVEEEETGCWAGLRFIGSCISSRSKVDSSVSSISTHYGRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLIHPNLVKLIGYSIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRNGRTQGGLLTRHGQQQRSLSIPHGSHASPYHHQFPLQSPKPNGKA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2304g00038 474 ProSiteProfiles Protein kinase domain profile. 118 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2304g00038 474 FunFam Serine/threonine-protein kinase BIK1 85 203 - -
Pral2304g00038 474 PANTHER OS01G0588500 PROTEIN-RELATED 83 401 - -
Pral2304g00038 474 Gene3D Phosphorylase Kinase; domain 1 98 203 - -
Pral2304g00038 474 ProSitePatterns Protein kinases ATP-binding region signature. 124 156 IPR017441 GO:0005524
Pral2304g00038 474 Pfam Protein tyrosine and serine/threonine kinase 122 398 IPR001245 GO:0004672|GO:0006468
Pral2304g00038 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Pral2304g00038 474 MobiDBLite consensus disorder prediction 1 34 - -
Pral2304g00038 474 CDD STKc_IRAK 124 401 - -
Pral2304g00038 474 Gene3D Transferase(Phosphotransferase) domain 1 204 419 - -
Pral2304g00038 474 MobiDBLite consensus disorder prediction 422 474 - -
Pral2304g00038 474 MobiDBLite consensus disorder prediction 62 90 - -
Pral2304g00038 474 FunFam Probable serine/threonine-protein kinase PBL8 204 419 - -
Pral2304g00038 474 MobiDBLite consensus disorder prediction 62 93 - -
Pral2304g00038 474 SUPERFAMILY Protein kinase-like (PK-like) 104 418 IPR011009 -
Pral2304g00038 474 MobiDBLite consensus disorder prediction 422 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2304g00038 Pral-Chr2304 248307 253151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2304g00038 87 398 Glycoside Hydrolase AT3G07070 56.467 2.75e-117 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral2304g00038 PK_Tyr_Ser-Thr 3.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2304g00038 - - qsa:O6P43_025413 832.787