Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2304g00033 | ATGGACTCACAGTTGGGTCTGATAGACCAATCATTCGACAGTCGTTACTCCTGCCATGTTCGCGAGGCGCTCGACGAATTGCCTGACAATTTTATCATCACCGACCCCTCTATCGCTGGCCACCCGATTGTTTTTGCGAGCCATGGGTTCTTGAAAATGTCAGGATATCCCAAAGAAGAGGTGATTGGCAAGAATGGTAAGATTTTTCAAGGACCAGGGACCTGTAGAAGATCGGTAATAGAAATTCGTGAGGCGATAAGAGAAGAGAGACCCATTCAGATCAATTTGTTGAATTACCGTAGAGATGGCAAACCTCTTTGGATTTTGTTTCACATGAGCCCCGTATTTAACAAGTATGATGGTAGGGTGAGTCACTTTGTGGCAGTTCAGGTACCTCTATCGAGGAAACGGAGGCGGTCGGGATGCGGTGTTAGGAAAACTGACGTTAATTTGAGTGATGATGGGTCTGTGGCTCAGGATTTTGTGCATGGATCATGTCGGAAGGAAGTGTGCTCGGATTCTTTGTTGGAACTCGGTCGTGTCTTGTCCCTTCATCAAGTTTCAGAAGTAGAACATGAAGGGAGAGAATCAAATGGTGAAGAACCGTGTGAGGCAAGTGATGTTGATAAGAGAAAAGCTATGACTGCCATGGACAACATTTTTTCTCTGCTAACCCACTACAGTGAGTTGACTGGCAGATTGGTATGTAGAAAGAGATGCAGCATTTCTGACGTGGGTTTTCTTAGTTCATCATTGATTATATCCCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCTCATTTACCTGACATGCCTATTGTGTATGCCAGTGAAGCCTTCTTGAAATTGACAGGTTACGTAAAAGATGAAGTGCTGGGACGCAACTGTAGATTTCTAAGTGGGCCAAATACTGATGCATCAGCTTTATATTTGATAAGGGAGAGCATTAAAGCTGAACAACCATGCACAGTACATATTTTGAATTACAGGAAGGACGAAAGCCCATTTTGGAATTTTCTACACATATCACCTATTCGTGATGCCTCTGGCAAGGGAGGCTAG | 1068 | 0.4354 | MDSQLGLIDQSFDSRYSCHVREALDELPDNFIITDPSIAGHPIVFASHGFLKMSGYPKEEVIGKNGKIFQGPGTCRRSVIEIREAIREERPIQINLLNYRRDGKPLWILFHMSPVFNKYDGRVSHFVAVQVPLSRKRRRSGCGVRKTDVNLSDDGSVAQDFVHGSCRKEVCSDSLLELGRVLSLHQVSEVEHEGRESNGEEPCEASDVDKRKAMTAMDNIFSLLTHYSELTGRLVCRKRCSISDVGFLSSSLIISLGRIKQSFVLTNPHLPDMPIVYASEAFLKLTGYVKDEVLGRNCRFLSGPNTDASALYLIRESIKAEQPCTVHILNYRKDESPFWNFLHISPIRDASGKGG | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2304g00033 | 355 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 265 | 353 | IPR035965 | - | |
Pral2304g00033 | 355 | ProSiteProfiles | PAS repeat profile. | 275 | 321 | IPR000014 | - | |
Pral2304g00033 | 355 | SMART | pac_2 | 93 | 136 | IPR001610 | - | |
Pral2304g00033 | 355 | Gene3D | PAS domain | 262 | 354 | - | - | |
Pral2304g00033 | 355 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 28 | 130 | IPR035965 | - | |
Pral2304g00033 | 355 | CDD | PAS | 27 | 130 | IPR000014 | - | |
Pral2304g00033 | 355 | SMART | pas_2 | 18 | 87 | IPR000014 | - | |
Pral2304g00033 | 355 | SMART | pas_2 | 250 | 319 | IPR000014 | - | |
Pral2304g00033 | 355 | FunFam | Protein TWIN LOV 1 isoform D | 30 | 226 | - | - | |
Pral2304g00033 | 355 | ProSiteProfiles | PAS repeat profile. | 16 | 65 | IPR000014 | - | |
Pral2304g00033 | 355 | CDD | PAS | 271 | 353 | IPR000014 | - | |
Pral2304g00033 | 355 | Pfam | PAS domain | 32 | 131 | IPR000014 | - | |
Pral2304g00033 | 355 | Pfam | PAS domain | 262 | 353 | IPR000014 | - | |
Pral2304g00033 | 355 | NCBIfam | PAS domain S-box protein | 21 | 128 | IPR000014 | - | |
Pral2304g00033 | 355 | NCBIfam | PAS domain S-box protein | 275 | 352 | IPR000014 | - | |
Pral2304g00033 | 355 | Gene3D | PAS domain | 17 | 141 | - | - | |
Pral2304g00033 | 355 | PANTHER | PROTEIN TWIN LOV 1 | 6 | 353 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2304g00033 | Pral-Chr2304 | 213486 | 216891 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2304g00033 | 15 | 353 | AGC Kinase Gene Family | AT5G58140 | 30.189 | 6.87e-52 | 182 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2304g00033 | - | - | qsa:O6P43_033065 | 475.322 |