Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2303g00001 ATGGAGGAGAATCACAAGAGAGCACCAGACTTCAACTCGTCTTCTTCTTCTTCTTCTGCCATGGCAGCGACATTTTCTGATGATGTTCTGATCAACCAAGCTTCTTTCTCCACCTTCTTCGATACGTCACCGTTTGGGTCCTACGATCAACGTCATCCTCATCATCAACCTGAGGACAAGACCAGCAATTGTAATTCCTTTGGGTTCATGGACATGCTGGGTGTCCAAGATTACGGTACTCCCTCTTTGTTCGATTGGCTTCCGGCCGCCACTACCACGGCATCGTCCGTCGCAGCTGATGTAGCCCACCAGTCCTCCTTCCCGTCACCGGCGAGCTCAGGTGGGGTGCTGAACACTCCGGCCTCCCCGAATTCCTCCTCGCTTTCGTCCTCGTCCAACGACGGCGCCGCCCCCGCCAGCGGCCACGGCAGTATGGAGGAAGAACAGCAGAGTTGCAAAGCAGAGGATGAAGATGTGGACGACGGAGGAAGAGGAGGCGACCAAGGACAAGACAAATCTAAGGAACTGGTGAAACCAAAAAAGAAGAAGCAAAAGAAGGAAAGAGAGCCAAGATTTGCGTTCATGACGAAAAGCGAAGTTGATCACCTCGACGATGGCTATAGGTGGCGTAAGTACGGCCAGAAAGCTGTCAAGAACAGCCCTTTTCCCAGGAGCTATTATCGATGCACGACGGTTGGTTGCGGCGTGAAGAAGAGGGTGGAGCGGTCGTCGGAGGACCCTACCATCGTGGTGACGACGTACGAGGGGCAGCACAAGCACCCAAGTCCGGCGGCGGCGGCGACTCGGTCCGGCCTTGTAGGGTACGGTGGTGGTTTTGGTTTTCCACAGCATTATGATCATCGTCAGTTCCAGCAGCAGAGCATGAATAACGTGTCGTCCTCTTCTTCATCGCCATTGTTGTACAACTCAAGTTCATCCATATTGAACAGTATTGGATCTGGCAGCTACATGAATATGAACTCATCGACGAGGACAACGTCGTTTCTGAGCTCGTACCATAACGGTAACAGATCAGCAGGTTTTGGGGGACTAGGGTCTAGAATGGATGAAGGTAGTTTGTTAAGAGACAATGGACTTCTTCAGGACATTTTCGTACCATCGCAGGTGATGATGAACAAGGATGAAAAGCAGTGA 1155 0.5186 MEENHKRAPDFNSSSSSSSAMAATFSDDVLINQASFSTFFDTSPFGSYDQRHPHHQPEDKTSNCNSFGFMDMLGVQDYGTPSLFDWLPAATTTASSVAADVAHQSSFPSPASSGGVLNTPASPNSSSLSSSSNDGAAPASGHGSMEEEQQSCKAEDEDVDDGGRGGDQGQDKSKELVKPKKKKQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTVGCGVKKRVERSSEDPTIVVTTYEGQHKHPSPAAAATRSGLVGYGGGFGFPQHYDHRQFQQQSMNNVSSSSSSPLLYNSSSSILNSIGSGSYMNMNSSTRTTSFLSSYHNGNRSAGFGGLGSRMDEGSLLRDNGLLQDIFVPSQVMMNKDEKQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2303g00001 384 FunFam WRKY transcription factor 57 189 263 - -
Pral2303g00001 384 SUPERFAMILY WRKY DNA-binding domain 195 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2303g00001 384 MobiDBLite consensus disorder prediction 104 138 - -
Pral2303g00001 384 MobiDBLite consensus disorder prediction 156 177 - -
Pral2303g00001 384 Gene3D WRKY domain 188 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2303g00001 384 SMART WRKY_cls 203 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2303g00001 384 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 301 IPR044810 GO:0003700
Pral2303g00001 384 Pfam WRKY DNA -binding domain 204 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2303g00001 384 ProSiteProfiles WRKY domain profile. 198 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2303g00001 384 MobiDBLite consensus disorder prediction 104 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2303g00001 Pral-Chr2303 8792 10860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2303g00001 65 377 WRKY Transcription Factor Family AT2G47260 39.766 6.80e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2303g00001 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2303g00001 - - pcin:129319667 327.02