Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2301g00005 ATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGACGGTTAAAAGATAAAAGATTGCTGAAAGATGAAACATGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTGATCCAGGACCGTGTAAGTGGGCTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCCTCTATGGCAATGACTTTTCTGCTGCAGATATGACGTATGAACGTAATAGACACTATGATGAAGATGATGGTGGAACAGATAACACATCTTCTGAGAGCAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATGTGGAGCCTTCTAGATATCTGACGGCTAACAGAGCTCTGCCACCTTTAGTTCCCAAAGCTGCAATTAACATTGGATATAAACCGTCAGGATATTTGAAAGTGAAGGGTGAGATAGAGAATGCTGCTATAACTGCTGTCAAGAAGCAATTAGGAAGGAACTATCGGGAAGATGGTCCACTGCTTAGTGTAGAATTTGATCCAGTTCCTCCGGGGGCATTAGAGTGTCAAATTGCAGATCCAGTTGATGAATCATTCCGTACTGTGAATCCTTCTCTTGGCAGTCCTCCAGAGATAGCTGGCGTGAAAAGGCAACCCGCACATAACTCTAGGTATGACTCCAAATATAGTTCCCATGATCTACATATGGAAGTAGGAGATCTTGGCTCCTTGCATGACACTGATTTGCTGGATAAGAAACCCCACCGGCACAAGCAAGGGCGGACATTGCAGAGTTATACCAATCATTTACCTCGGAGGAACTCCTCCCTGGAGTTTTATGAAGATCCCACTGAAGAAGTGCCTGTTTATAATACAATGGGCTCTAAGCATGGTGAAGGAATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTTTGAAGAGGACCTTGTAGTTAAGCAGACAGATTCACTTCTGCGTTGCTATGATAATGTCAATCCAAAGAAAATTCAGAAGGGTGAACATGTGAAATCTAAGCCTTCAAATTCATTAAAAAAGTCTCGCATTTCTCTTGGTACTGAAGAAAGAGGACTAACTCCAAGGATAGCAAAGGAAGAGAAGTTTAGTGGAGACAAGAAGGCAAGAAAACAATATCATGATTCAGAGAGAATAAGGATTCTTTCAAATGAAACCATGATTGCAAAAAGAGTTAAAGATGATCTTCCTCAACAACACAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACAGAGATGCTTTCTAGCTTTAGTGAGGATGAAACCGCTGAAACCGGTTCTTCGCTGGACTAA 1404 0.4195 MKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDETCANGRQDRSSGVIQDRVSGLGQDSCGSTKHGDYKHLDLKEVESHGLYGNDFSAADMTYERNRHYDEDDGGTDNTSSESSSSLQDQLFSQGQDPYNVEPSRYLTANRALPPLVPKAAINIGYKPSGYLKVKGEIENAAITAVKKQLGRNYREDGPLLSVEFDPVPPGALECQIADPVDESFRTVNPSLGSPPEIAGVKRQPAHNSRYDSKYSSHDLHMEVGDLGSLHDTDLLDKKPHRHKQGRTLQSYTNHLPRRNSSLEFYEDPTEEVPVYNTMGSKHGEGMRSDSASNHSDHFEEDLVVKQTDSLLRCYDNVNPKKIQKGEHVKSKPSNSLKKSRISLGTEERGLTPRIAKEEKFSGDKKARKQYHDSERIRILSNETMIAKRVKDDLPQQHNLKHALVAEMQPQKNRRSATEMLSSFSEDETAETGSSLD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2301g00005 467 MobiDBLite consensus disorder prediction 35 64 - -
Pral2301g00005 467 MobiDBLite consensus disorder prediction 436 467 - -
Pral2301g00005 467 Gene3D - 1 46 - -
Pral2301g00005 467 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 467 - -
Pral2301g00005 467 MobiDBLite consensus disorder prediction 40 60 - -
Pral2301g00005 467 MobiDBLite consensus disorder prediction 108 132 - -
Pral2301g00005 467 Pfam Homeodomain 2 29 IPR001356 GO:0003677
Pral2301g00005 467 MobiDBLite consensus disorder prediction 441 467 - -
Pral2301g00005 467 ProSiteProfiles 'Homeobox' domain profile. 1 30 IPR001356 GO:0003677
Pral2301g00005 467 MobiDBLite consensus disorder prediction 221 243 - -
Pral2301g00005 467 SUPERFAMILY Homeodomain-like 2 38 IPR009057 -
Pral2301g00005 467 MobiDBLite consensus disorder prediction 97 132 - -
Pral2301g00005 467 CDD homeodomain 1 29 IPR001356 GO:0003677
Pral2301g00005 467 MobiDBLite consensus disorder prediction 355 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2301g00005 Pral-Chr2301 13030 18248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2301g00005 1 467 Homeobox Transcription Factor Family AT4G03250 38.945 5.85e-60 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral2301g00005 Homeodomain 3.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2301g00005 - - gmx:100803515 579.326