Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2301g00004 ATGGAGAAAAATAAGAAAAGGAGGCTTAAAACGCCGGCCCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGACGGTTAAAAGATAAAAGATTGCTGAAAGATGAAACATGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTGATCCAGGACCGTGTAAGTGGGCTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCCTCTATGGCAATGACTTTTCTGCTGCAGATATGACGTATGAACGTAATAGACACTATGATGAAGATGATGGTGGAACAGATAACACATCTTCTGAGAGCAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATGTGGAGCCTTCTAGATATCTGACGGCTAACAGAGCTCTGCCACCTTTAGTTCCCAAAGCTGCAATTAACATTGGATATAAACCGTCAGGATATTTGAAAGTGAAGGGTGAGATAGAGAATGCTGCTATAACTGCTGTCAAGAAGCAATTAGGAAGGAACTATCGGGAAGATGGTCCACTGCTTAGTGTAGAATTTGATCCAGTTCCTCCGGGGGCATTAGAGTGTCAAATTGCAGATCCAGTTGATGAATCATTCCGTACTGTGAATCCTTCTCTTGGCAGTCCTCCAGAGATAGCTGGCGTGAAAAGGCAACCCGCACATAACTCTAGGTATGACTCCAAATATAGTTCCCATGATCTACATATGGAAGTAGGAGATCTTGGCTCCTTGCATGACACTGATTTGCTGGATAAGAAACCCCACCGGCACAAGCAAGGGCGGACATTGCAGAGTTATACCAATCATTTACCTCGGAGGAACTCCTCCCTGGAGTTTTATGAAGATCCCACTGAAGAAGTGCCTGTTTATAATACAATGGGCTCTAAGCATGGTGAAGGAATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTTTGAAGAGGACCTTGTAGTTAAGCAGACAGATTCACTTCTGCGTTGCTATGATAATGTCAATCCAAAGAAAATTCAGAAGGGTGAACATGTGAAATCTAAGCCTTCAAATTCATTAAAAAAGTCTCGCATTTCTCTTGGTACTGAAGAAAGAGGACTAACTCCAAGGATAGCAAAGGAAGAGAAGTTTAGTGGAGACAAGAAGGCAAGAAAACAATATCATGATTCAGAGAGAATAAGGATTCTTTCAAATGAAACCATGATTGCAAAAAGAGTTAAAGATGATCTTCCTCAACAACACAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACAGAGATGCTTTCTAGCTTTAGTGAGGATGAAACCGCTGAAACCGGTTCTTCGCTGGACTAA 1497 0.4195 MEKNKKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDETCANGRQDRSSGVIQDRVSGLGQDSCGSTKHGDYKHLDLKEVESHGLYGNDFSAADMTYERNRHYDEDDGGTDNTSSESSSSLQDQLFSQGQDPYNVEPSRYLTANRALPPLVPKAAINIGYKPSGYLKVKGEIENAAITAVKKQLGRNYREDGPLLSVEFDPVPPGALECQIADPVDESFRTVNPSLGSPPEIAGVKRQPAHNSRYDSKYSSHDLHMEVGDLGSLHDTDLLDKKPHRHKQGRTLQSYTNHLPRRNSSLEFYEDPTEEVPVYNTMGSKHGEGMRSDSASNHSDHFEEDLVVKQTDSLLRCYDNVNPKKIQKGEHVKSKPSNSLKKSRISLGTEERGLTPRIAKEEKFSGDKKARKQYHDSERIRILSNETMIAKRVKDDLPQQHNLKHALVAEMQPQKNRRSATEMLSSFSEDETAETGSSLD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2301g00004 498 MobiDBLite consensus disorder prediction 128 163 - -
Pral2301g00004 498 MobiDBLite consensus disorder prediction 467 498 - -
Pral2301g00004 498 ProSiteProfiles 'Homeobox' domain profile. 1 61 IPR001356 GO:0003677
Pral2301g00004 498 MobiDBLite consensus disorder prediction 71 91 - -
Pral2301g00004 498 MobiDBLite consensus disorder prediction 139 163 - -
Pral2301g00004 498 SUPERFAMILY Homeodomain-like 3 69 IPR009057 -
Pral2301g00004 498 MobiDBLite consensus disorder prediction 472 498 - -
Pral2301g00004 498 Pfam Homeodomain 5 60 IPR001356 GO:0003677
Pral2301g00004 498 MobiDBLite consensus disorder prediction 386 408 - -
Pral2301g00004 498 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 498 - -
Pral2301g00004 498 Gene3D - 1 77 - -
Pral2301g00004 498 MobiDBLite consensus disorder prediction 64 95 - -
Pral2301g00004 498 CDD homeodomain 5 60 IPR001356 GO:0003677
Pral2301g00004 498 SMART HOX_1 3 65 IPR001356 GO:0003677
Pral2301g00004 498 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2301g00004 Pral-Chr2301 12186 18248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2301g00004 2 498 Homeobox Transcription Factor Family AT4G03250 41.300 7.21e-79 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral2301g00004 Homeodomain 8.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2301g00004 - - gmx:100803515 632.098