Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2301g00003 ATGAGAGTCATGGAAGAATCAGGTGAATTGCAATCGGAAGAGAATAAAGTTTCTATGGAGAAAAATAAGAAAAGGAGGCTTAAAACGCCGGCCCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGACGGTTAAAAGATAAAAGATTGCTGAAAGATGAAACATGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTGATCCAGGACCGTGTAAGTGGGCTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCCTCTATGGCAATGACTTTTCTGCTGCAGATATGACGTATGAACGTAATAGACACTATGATGAAGATGATGGTGGAACAGATAACACATCTTCTGAGAGCAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATGTGGAGCCTTCTAGATATCTGACGGCTAACAGAGCTCTGCCACCTTTAGTTCCCAAAGCTGCAATTAACATTGGATATAAACCGTCAGGATATTTGAAAGTGAAGGGTGAGATAGAGAATGCTGCTATAACTGCTGTCAAGAAGCAATTAGGAAGGAACTATCGGGAAGATGGTCCACTGCTTAGTGTAGAATTTGATCCAGTTCCTCCGGGGGCATTAGAGTGTCAAATTGCAGATCCAGTTGATGAATCATTCCGTACTGTGAATCCTTCTCTTGGCAGTCCTCCAGAGATAGCTGGCGTGAAAAGGCAACCCGCACATAACTCTAGGTATGACTCCAAATATAGTTCCCATGATCTACATATGGAAGTAGGAGATCTTGGCTCCTTGCATGACACTGATTTGCTGGATAAGAAACCCCACCGGCACAAGCAAGGGCGGACATTGCAGAGTTATACCAATCATTTACCTCGGAGGAACTCCTCCCTGGAGTTTTATGAAGATCCCACTGAAGAAGTGCCTGTTTATAATACAATGGGCTCTAAGCATGGTGAAGGAATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTTTGAAGAGGACCTTGTAGTTAAGCAGACAGATTCACTTCTGCGTTGCTATGATAATGTCAATCCAAAGAAAATTCAGAAGGGTGAACATGTGAAATCTAAGCCTTCAAATTCATTAAAAAAGTCTCGCATTTCTCTTGGTACTGAAGAAAGAGGACTAACTCCAAGGATAGCAAAGGAAGAGAAGTTTAGTGGAGACAAGAAGGCAAGAAAACAATATCATGATTCAGAGAGAATAAGGATTCTTTCAAATGAAACCATGGTCTGCAACAGAGATGCTTTCTAG 1416 0.4181 MRVMEESGELQSEENKVSMEKNKKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDETCANGRQDRSSGVIQDRVSGLGQDSCGSTKHGDYKHLDLKEVESHGLYGNDFSAADMTYERNRHYDEDDGGTDNTSSESSSSLQDQLFSQGQDPYNVEPSRYLTANRALPPLVPKAAINIGYKPSGYLKVKGEIENAAITAVKKQLGRNYREDGPLLSVEFDPVPPGALECQIADPVDESFRTVNPSLGSPPEIAGVKRQPAHNSRYDSKYSSHDLHMEVGDLGSLHDTDLLDKKPHRHKQGRTLQSYTNHLPRRNSSLEFYEDPTEEVPVYNTMGSKHGEGMRSDSASNHSDHFEEDLVVKQTDSLLRCYDNVNPKKIQKGEHVKSKPSNSLKKSRISLGTEERGLTPRIAKEEKFSGDKKARKQYHDSERIRILSNETMVCNRDAF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2301g00003 471 Pfam Homeodomain 23 78 IPR001356 GO:0003677
Pral2301g00003 471 CDD homeodomain 23 78 IPR001356 GO:0003677
Pral2301g00003 471 MobiDBLite consensus disorder prediction 86 113 - -
Pral2301g00003 471 Gene3D - 11 95 - -
Pral2301g00003 471 MobiDBLite consensus disorder prediction 404 430 - -
Pral2301g00003 471 SMART HOX_1 21 83 IPR001356 GO:0003677
Pral2301g00003 471 MobiDBLite consensus disorder prediction 270 292 - -
Pral2301g00003 471 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Pral2301g00003 471 ProSiteProfiles 'Homeobox' domain profile. 19 79 IPR001356 GO:0003677
Pral2301g00003 471 MobiDBLite consensus disorder prediction 146 181 - -
Pral2301g00003 471 MobiDBLite consensus disorder prediction 89 109 - -
Pral2301g00003 471 MobiDBLite consensus disorder prediction 157 181 - -
Pral2301g00003 471 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 468 - -
Pral2301g00003 471 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2301g00003 Pral-Chr2301 11603 18248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2301g00003 6 357 Homeobox Transcription Factor Family AT4G03250 47.283 1.24e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral2301g00003 Homeodomain 7.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2301g00003 - - gmx:100803515 602.438