Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2301g00002 ATGAGAGTCATGGAAGAATCAGGTGAATTGCAATCGGAAGAGAATAAAGTTTCTATGGAGAAAAATAAGAAAAGGAGGCTTAAAACGCCGGCCCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGACGGTTAAAAGATAAAAGATTGCTGAAAGATGAAACATGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTGATCCAGGACCGTGTAAGTGGGCTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCCTCTATGGCAATGACTTTTCTGCTGCAGATATGACGTATGAACGTAATAGACACTATGATGAAGATGATGGTGGAACAGATAACACATCTTCTGAGAGCAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATGTGGAGCCTTCTAGATATCTGACGGCTAACAGAGCTCTGCCACCTTTAGTTCCCAAAGCTGCAATTAACATTGGATATAAACCGTCAGGATATTTGAAAGTGAAGGGTGAGATAGAGAATGCTGCTATAACTGCTGTCAAGAAGCAATTAGGAAGGAACTATCGGGAAGATGGTCCACTGCTTAGTGTAGAATTTGATCCAGTTCCTCCGGGGGCATTAGAGTGTCAAATTGCAGATCCAGTTGATGAATCATTCCGTACTGTGAATCCTTCTCTTGGCAGTCCTCCAGAGATAGCTGGCGTGAAAAGGCAACCCGCACATAACTCTAGGTATGACTCCAAATATAGTTCCCATGATCTACATATGGAAGTAGGAGATCTTGGCTCCTTGCATGACACTGATTTGCTGGATAAGAAACCCCACCGGCACAAGCAAGGGCGGACATTGCAGAGTTATACCAATCATTTACCTCGGAGGAACTCCTCCCTGGAGTTTTATGAAGATCCCACTGAAGAAGTGCCTGTTTATAATACAATGGGCTCTAAGCATGGTGAAGGAATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTTTGAAGAGGACCTTGTAGTTAAGCAGACAGATTCACTTCTGCGTTGCTATGATAATGTCAATCCAAAGAAAATTCAGAAGGGTGAACATGTGAAATCTAAGCCTTCAAATTCATTAAAAAAGTCTCGCATTTCTCTTGGTACTGAAGAAAGAGGACTAACTCCAAGGATAGCAAAGGAAGAGAAGTTTAGTGGAGACAAGAAGGCAAGAAAACAATATCATGATTCAGAGAGAATAAGGATTCTTTCAAATGAAACCATGATTGCAAAAAGAGTTAAAGATGATCTTCCTCAACAACACAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACAGAGATGCTTTCTAGCTTTAGTGAGGATGAAACCGCTGAAACCGGTTCTTCGCTGGACTAA 1551 0.4178 MRVMEESGELQSEENKVSMEKNKKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDETCANGRQDRSSGVIQDRVSGLGQDSCGSTKHGDYKHLDLKEVESHGLYGNDFSAADMTYERNRHYDEDDGGTDNTSSESSSSLQDQLFSQGQDPYNVEPSRYLTANRALPPLVPKAAINIGYKPSGYLKVKGEIENAAITAVKKQLGRNYREDGPLLSVEFDPVPPGALECQIADPVDESFRTVNPSLGSPPEIAGVKRQPAHNSRYDSKYSSHDLHMEVGDLGSLHDTDLLDKKPHRHKQGRTLQSYTNHLPRRNSSLEFYEDPTEEVPVYNTMGSKHGEGMRSDSASNHSDHFEEDLVVKQTDSLLRCYDNVNPKKIQKGEHVKSKPSNSLKKSRISLGTEERGLTPRIAKEEKFSGDKKARKQYHDSERIRILSNETMIAKRVKDDLPQQHNLKHALVAEMQPQKNRRSATEMLSSFSEDETAETGSSLD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2301g00002 516 Gene3D - 11 95 - -
Pral2301g00002 516 CDD homeodomain 23 78 IPR001356 GO:0003677
Pral2301g00002 516 MobiDBLite consensus disorder prediction 404 426 - -
Pral2301g00002 516 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Pral2301g00002 516 MobiDBLite consensus disorder prediction 82 113 - -
Pral2301g00002 516 SMART HOX_1 21 83 IPR001356 GO:0003677
Pral2301g00002 516 Pfam Homeodomain 23 78 IPR001356 GO:0003677
Pral2301g00002 516 MobiDBLite consensus disorder prediction 270 292 - -
Pral2301g00002 516 ProSiteProfiles 'Homeobox' domain profile. 19 79 IPR001356 GO:0003677
Pral2301g00002 516 MobiDBLite consensus disorder prediction 146 181 - -
Pral2301g00002 516 MobiDBLite consensus disorder prediction 89 109 - -
Pral2301g00002 516 MobiDBLite consensus disorder prediction 490 516 - -
Pral2301g00002 516 MobiDBLite consensus disorder prediction 157 181 - -
Pral2301g00002 516 MobiDBLite consensus disorder prediction 1 28 - -
Pral2301g00002 516 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 516 - -
Pral2301g00002 516 MobiDBLite consensus disorder prediction 485 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2301g00002 Pral-Chr2301 11602 18248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2301g00002 6 516 Homeobox Transcription Factor Family AT4G03250 41.450 7.14e-82 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral2301g00002 Homeodomain 9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2301g00002 - - gmx:100803515 656.751