Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2300g00003 ATGGTAGTGAGGAAGGTGGGAAAGTACGAAATCGGGAGAACAGTTGGGGAGGGAACCTTCGCCAAGGTGAAGTTCGCTCAGAACACAGAGACTGGCGAGAGTGTCGCCATGAAAGTGCTCGACCGTAGCACCATCATCAAGCACAAGATGGTCGATCAGATCAAGAAGGAGATTTCTATCATGAAGCTAGTTCGACATCCATATGTTGTTCGTCTGCATGAGGTTCTAGCAAGTCGTACAAAGATTTACATCATATTGGAGTTCATTACAGGTGGTGAATTGTTTGATAAAATTGTACACCATGGCCGTCTTAGTGAAGCTGAAGCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAGGGAGTCTATCACAGAGATTTGAAGCCTGAAAATTTACTGCTAGATTCTTTAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTGCCAGAACAGGGGGTTAGTGTCCTTCGGACGACTTGTGGGACTCCAAACTATGTAGCCCCTGAGGTACTTAGTCACAAGGGTTACAATGGAGCCGCAGCAGATGTTTGGTCCTGTGGGGTTATTCTTTATGTTCTAATTGCTGGATATCTTCCCTTTGATGAGTTGGATCTAACTACCTTATACAGTAAGATTGAGAATGCAGAGTTTTCATGCCCTTCGTGGTTTCCTGTGGGAGCAAAAGCTTTAATACATAGAATTTTGGACCCAAATCCTGAAACTCGCATGACCATTGAACAGATAAAAAGTGATGAGTGGTTTCAGAAGAACTATGTTCCTGTCAGTCTTCTTGAGCATGAAGATGTGAACCTGGATGATGTAAATGCAGCTTTCGATGATGCTGAGGATCAGCGGGTTAACCAACAATGTGAAAACGAAGACGGGGGTCCATTAATGCTTAGTGCATTTGACTTGATAATTCTATCTCAAGGCTTAAATCTTGCAACAATCTTCGATCGTGGACGGGATTCCATGAAGTACCCAACACGCTTTATCTCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGCATGGAAGTTGTGGCTCAGTCAATGGGATTTAAGACGCATATTCGCAACTATAAGATGAGAGTGGAGGGTATGGCAGCAAATAAAACTTTTTTCTCAGTCATCCTGGAAGTTTTTGAAGTTGCTCCGTCATTCTTTATGGTGGACATTCAAAAGGCAGCTGGAGACGTAGGTGAATACCTCAAGTTTTACAAGAACTTCTGTAGCAATCTTGATGATATCATCTGGAAACCGCCTTATGAAGAAAGCAAATCAAGGAGCTCTAGCAATAAAAGTAGAAGGCGATCCTTTCACTTCATGTGA 1353 0.422 MVVRKVGKYEIGRTVGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKKEISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRLSEAEARRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNIKISDFGLSALPEQGVSVLRTTCGTPNYVAPEVLSHKGYNGAAADVWSCGVILYVLIAGYLPFDELDLTTLYSKIENAEFSCPSWFPVGAKALIHRILDPNPETRMTIEQIKSDEWFQKNYVPVSLLEHEDVNLDDVNAAFDDAEDQRVNQQCENEDGGPLMLSAFDLIILSQGLNLATIFDRGRDSMKYPTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGMAANKTFFSVILEVFEVAPSFFMVDIQKAAGDVGEYLKFYKNFCSNLDDIIWKPPYEESKSRSSSNKSRRRSFHFM 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2300g00003 450 FunFam Non-specific serine/threonine protein kinase 303 426 - -
Pral2300g00003 450 Pfam NAF domain 305 363 IPR004041 GO:0007165
Pral2300g00003 450 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Pral2300g00003 450 Gene3D Transferase(Phosphotransferase) domain 1 3 306 - -
Pral2300g00003 450 Gene3D Kinase associated domain 1, KA1 307 427 - -
Pral2300g00003 450 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Pral2300g00003 450 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 410 - -
Pral2300g00003 450 CDD CIPK_C 310 423 - -
Pral2300g00003 450 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2300g00003 450 MobiDBLite consensus disorder prediction 431 450 - -
Pral2300g00003 450 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Pral2300g00003 450 Coils Coil 272 299 - -
Pral2300g00003 450 SUPERFAMILY Protein kinase-like (PK-like) 6 275 IPR011009 -
Pral2300g00003 450 FunFam Non-specific serine/threonine protein kinase 2 303 - -
Pral2300g00003 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pral2300g00003 450 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2300g00003 450 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2300g00003 Pral-Chr2300 18461 24053 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2300g00003 1 387 CBL-interacting serine-threonine protein kinases AT4G24400 82.216 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral2300g00003 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2300g00003 - - gmx:100813117 797.349