Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral229g00003 ATGGCTTCAAATGTGTTGTTGAGTGAACAAAAGCACGAGGAGAGGAAAGAAGAACTTGTGTTTCCATGTGAGCTTGGGAACGAGGTTGAGTTACCTAAAAACTGTGTATGGTCAAAGGAATATTTGGATGCTTACTTTAAGCAACCGGTTGATGCAAAAGTAAAGGCCTATAAACCTAAGAGTTCCTTGGCAGGCTATCCAGGTGCTCATTCTGAACGCTTCTCTTCTAACCTAACTTGGAAGGAGACCCTCACTTTCTTGCTTCCTCATGATGATCCACAACCTGCTATTAGAGACTACTTTGTCTCCACCTTAGGCCAAGACTTTTATGAAACTAGTTGGGCTGGTGTCACCTGCAATACTCATCATGGAAGGGTCCATTCCTTGATTCTTCGTAGCATGGATCTTAAGGGTAGCATATCTCCACAGCTAGGAAACCTCTCCTTCCTAGTTGATCTTGATATCAGTAAAAACAACTTTCATGGTCCAATTCCTCAAGACTTGGTTCAATTACGTCGATTGAGACTGTTCAACTTGAGCTATAATGACTTTCACGGACAAGTTCCAACATGGATAGGAGATTTATCTCTACTTGAGCAGTTGAGTTTTCGAAATAACAGTCTCAATGGGTTTATTCCATTATCTCTATTCAATCTATCAAGGTTGGAGACTTTGGATTGGAACTCTAATATCATTGAAGGTACCATCCCACCTGAGATAGGAAGTCTAAAGCAATTGAAGAATTTACAACTTTCAAGGAACAAACTTTCAGGAGCAATTCCCCAAACAATTTTCAACTTATCTTCACTTGAAGTGCTATGGTTGTCTTATAATAATTTGTCAGGAGCCATTCCAAATGAAATTGGTGATCTTCAGCAGCTTCATGCAATATATCTTGGAAGTAATCAGCTTTCAAGCACTATACCAACCTGCATGTTTAATAGTTCGGTACGACGATACATTGAACTTCACACCAATAATTTATCTGGGAGTCTGCCAACAAATGTGTGTTCTGGGCTTCCAAAACTTGAAATACTATATCTCTATCAAAATGATTTGTCTGGCGAGATACCCTCCATTTGGCATCAATGCAAGGAATTGGTAGAGTTATCATTAGGGGATAACAAGTTCAATGGAGGAAACATACCAAGTGACATTGGAAATTTGACCAAACTTGAGTGGCTACATCTTAGCAACAGCAACTTGCGAGGTGAAATTCCTTCATTTCTTTGGAAAATGCCTTGTTTGAGAATTGTTGAACTTGACAACAATCATTTAAAGGATAGTTTGCCAGAAGAAATGTGTCATCATCTCCCTTTACTTGAAGTCTTTGGTGTTGATGATAATCAATTAGAGGGAAGCATTCCAAGCTCAATAAGCAACTGCACATCTTTGAAAGAATTATATTTGGATGGTAACTCATTTACAGATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGCAAAAAAGAAAGGAATTACATGACAAAAAAAGTGAAGTTGTTGATAAAATGCTTACTTCCTATTGTGGTTGTCATTCTGGTTGTTTCATGCATTGTCTTTCTAAGACATAAGAGAGATGTGTATGCTAGTGGTTCAACCAACAATGAGTTAATAAATGTAGGGACACCAATTAGGATATCCTATTATGATCTTTTGCATGGAACAAATAGATTTGATGAGAGTAATCTTCTTGGCATTGGATATTATGGATCAGTATACAAAGCAACTCTTCCAAACGGAAGGATCGTTGCTGTTAAAGTATTTCGCTCAGACTTGGATGAAGCATTAAGGAGTTTTGATATTGAGTGTGTTGCAATATGCAATTTACGACACCGCAACCTTATTAAGAATATTAGTAGCTGCTCCAATGATCATTTCAAGTGTCTAATAATGGAGTTCATGTCAAATGGGAGTCTCGACAGATGGTTATACTCTCATAACAATTGTTTAGACATCCTAACAAGGTTGAATATAATGATTGATGTGGCAGTTGCGTTAGAATATCTTCATCATGGTTCTTCTACACCAGTTGTTCATTGTGATGTTAAACCAAGCAATGTCTTGTTAGATGAAAATATGGTGGCTCATCTCACTGATTTTGGTATAGCTAAATTGATGGGTGAAGAAGAGTTGGAAATTTATACAAAAACTTTAGCTACAATGGGTTATATGGCACCAGAGTATGGATCAAAAGGAGTTGTTTCCATTAAAGGAGATGTGTACAGCTATGGTATTTTGTTAATGGAAATGCTTACGAGAAAGAAGCCAACAGATGACATGTTTGCTGAAAGTCTAAGCTTAAAAGATTGGGTTAGCACATCAACACCTCATTCTGTCATTAGTATTCTAGATGCAAATTTGCTGCACAATCAAAATATTGGTGATGTATCACCACATATGTCATCAATTTTTGAGGTGGCATTAAATTGTTGCGTTGATTCACCTGAGGCACGACCTACAATGATTGATGTTGTGGTATCGATCAAAAAAAGCAAGTTTGCATTAATACAAATATTAGAGGCACCCCAAGTTAAATAA 2544 0.3742 MASNVLLSEQKHEERKEELVFPCELGNEVELPKNCVWSKEYLDAYFKQPVDAKVKAYKPKSSLAGYPGAHSERFSSNLTWKETLTFLLPHDDPQPAIRDYFVSTLGQDFYETSWAGVTCNTHHGRVHSLILRSMDLKGSISPQLGNLSFLVDLDISKNNFHGPIPQDLVQLRRLRLFNLSYNDFHGQVPTWIGDLSLLEQLSFRNNSLNGFIPLSLFNLSRLETLDWNSNIIEGTIPPEIGSLKQLKNLQLSRNKLSGAIPQTIFNLSSLEVLWLSYNNLSGAIPNEIGDLQQLHAIYLGSNQLSSTIPTCMFNSSVRRYIELHTNNLSGSLPTNVCSGLPKLEILYLYQNDLSGEIPSIWHQCKELVELSLGDNKFNGGNIPSDIGNLTKLEWLHLSNSNLRGEIPSFLWKMPCLRIVELDNNHLKDSLPEEMCHHLPLLEVFGVDDNQLEGSIPSSISNCTSLKELYLDGNSFTDLCGKSQLQVQPCKKERNYMTKKVKLLIKCLLPIVVVILVVSCIVFLRHKRDVYASGSTNNELINVGTPIRISYYDLLHGTNRFDESNLLGIGYYGSVYKATLPNGRIVAVKVFRSDLDEALRSFDIECVAICNLRHRNLIKNISSCSNDHFKCLIMEFMSNGSLDRWLYSHNNCLDILTRLNIMIDVAVALEYLHHGSSTPVVHCDVKPSNVLLDENMVAHLTDFGIAKLMGEEELEIYTKTLATMGYMAPEYGSKGVVSIKGDVYSYGILLMEMLTRKKPTDDMFAESLSLKDWVSTSTPHSVISILDANLLHNQNIGDVSPHMSSIFEVALNCCVDSPEARPTMIDVVVSIKKSKFALIQILEAPQVK 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral229g00003 847 Gene3D Ribonuclease Inhibitor 99 228 IPR032675 -
Pral229g00003 847 SMART LRR_typ_2 438 462 IPR003591 -
Pral229g00003 847 SMART LRR_typ_2 243 267 IPR003591 -
Pral229g00003 847 SMART LRR_typ_2 340 363 IPR003591 -
Pral229g00003 847 SMART LRR_typ_2 291 315 IPR003591 -
Pral229g00003 847 SMART LRR_typ_2 413 437 IPR003591 -
Pral229g00003 847 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 636 842 - -
Pral229g00003 847 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 477 831 - -
Pral229g00003 847 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 285 380 - -
Pral229g00003 847 Gene3D Ribonuclease Inhibitor 380 483 IPR032675 -
Pral229g00003 847 Pfam Leucine rich repeat 416 474 IPR001611 GO:0005515
Pral229g00003 847 Pfam Leucine rich repeat 245 304 IPR001611 GO:0005515
Pral229g00003 847 SUPERFAMILY RNI-like 129 486 - -
Pral229g00003 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Pral229g00003 847 FunFam Nuclear pore complex protein NUP107 99 228 - -
Pral229g00003 847 ProSitePatterns Protein kinases ATP-binding region signature. 566 588 IPR017441 GO:0005524
Pral229g00003 847 SMART serkin_6 560 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral229g00003 847 Gene3D Phosphorylase Kinase; domain 1 524 635 - -
Pral229g00003 847 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 229 284 - -
Pral229g00003 847 Gene3D Ribonuclease Inhibitor 229 379 IPR032675 -
Pral229g00003 847 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 383 478 - -
Pral229g00003 847 Pfam Protein kinase domain 561 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral229g00003 847 Gene3D Transferase(Phosphotransferase) domain 1 636 839 - -
Pral229g00003 847 SUPERFAMILY Protein kinase-like (PK-like) 538 828 IPR011009 -
Pral229g00003 847 ProSiteProfiles Leucine-rich repeat profile. 464 485 IPR001611 GO:0005515
Pral229g00003 847 ProSiteProfiles Protein kinase domain profile. 560 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral229g00003 Pral-Chr229 141434 206197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral229g00003 125 835 Receptor kinase-like Gene Family AT3G47570 34.500 3.32e-119 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral229g00003 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral229g00003 - K13420 pcin:129285519 639.032