Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2298g00029 ATGGCTCTTCTTCGCACAAAGGTGGATGAAACGGCTAGAGAGCAGCGGGTTAACGCGCATCGTTCTAAGCATTCAGAAACTGAGCAGCGTAGAAGGAGCAAGATAAATGAAAGATTTCAGATTCTGAGAGACCTCATTCCTCAAAATGATCAAAAAAGGGATAAGGCTTCTTTCTTGTTGGAGGTTATCGAGTATATTCAATTTTTACAGGAGAAATTACAGATGTATGAGCAATCTTACCAAGGCTGGAACCAGGAGCCAATGAAATTAATTCCTTGGAGAAATCATTGTGGACCAACTGATAATGTCACATCTCAGGCTATACAAAATGGTTCTGGCCATGAGAACAATGACATTGTCTCTCCATCACTGCCGCTAAATGCACAGAATACAATTGAATCTGACTTGTCACCAACAGTTATCCATAAGGCTGGGCCCCCTGGTTTAGCTTCTGATGCGGTTCCCCTGGGCATGCAAATGCGGCTGGACATGTTTGATCTGGCTGTGAGCAGTGGCCTTCCAACCCAACATTTACATGAAGCAGTTTCTAACACCGAGAACACACCTTCCAATACTCAGCCTCACGAGTGTCTTGGTGAACCCAAGGAGGGTGCATATGATTTTCGAAATAATACATTGAAGGATCAAGACGAGCTGACATTTGAAAGTGAATCGGTTAGCATCTCAAGAGCCTATTCTCAGGGAATATTGGATAATTTCATGCAAGCATTGCGGTCTTCGGGTGTGGATTTATCTGAGGCCAACGTTGCAGTACAAATTGATGTAGGGAGACGATCAATTGCCTCCACGTCTAGCTCAAAGGATCATGGGAACCAATTTGTGAACACGCAATCAATACCATGCCCAGGAGTCGACTACTACAGTGAGGATTCTGAGCAAGCTCTTAAGAGGCTCAGACGAGAAGAGAGTCTGCCTCAAGAAATGATGGTGGGATCTAAAGGACAACATGGTATGATCACGTTTCAATGGAATTAG 996 0.4408 MALLRTKVDETAREQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQMYEQSYQGWNQEPMKLIPWRNHCGPTDNVTSQAIQNGSGHENNDIVSPSLPLNAQNTIESDLSPTVIHKAGPPGLASDAVPLGMQMRLDMFDLAVSSGLPTQHLHEAVSNTENTPSNTQPHECLGEPKEGAYDFRNNTLKDQDELTFESESVSISRAYSQGILDNFMQALRSSGVDLSEANVAVQIDVGRRSIASTSSSKDHGNQFVNTQSIPCPGVDYYSEDSEQALKRLRREESLPQEMMVGSKGQHGMITFQWN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2298g00029 331 MobiDBLite consensus disorder prediction 7 32 - -
Pral2298g00029 331 Pfam Helix-loop-helix DNA-binding domain 21 70 IPR011598 GO:0046983
Pral2298g00029 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 98 IPR036638 GO:0046983
Pral2298g00029 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 19 69 IPR011598 GO:0046983
Pral2298g00029 331 MobiDBLite consensus disorder prediction 1 32 - -
Pral2298g00029 331 FunFam BHLH domain class transcription factor 17 89 - -
Pral2298g00029 331 Coils Coil 66 86 - -
Pral2298g00029 331 SMART finulus 25 75 IPR011598 GO:0046983
Pral2298g00029 331 CDD bHLH_AtBIM_like 18 94 - -
Pral2298g00029 331 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 4 307 IPR044295 GO:0003700|GO:0006351|GO:0046983
Pral2298g00029 331 Gene3D - 17 90 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2298g00029 Pral-Chr2298 423539 429337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2298g00029 16 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 41.797 4.65e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral2298g00029 HLH 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2298g00029 - - gmx:100791730 377.481