Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2298g00024 ATGGTTCGTCAAACTGATTTAGTCGCCTTTGGGGTCTCTGCTGGTTTGGCCTTTGGAATTTTGATAGCTTGTCTCATATGTTTGGTCATTAATTGGTATAAGAAGCGCGCTCATCTTAGACGGTGTGCAAATGAGCGCAGTCTAACAACACTTCCAATACGCACAAATGGATTAGAAACCAGCACCGACTTTAGTGCTTCTCTTTCTAGTTCCATAGCTGCTCCAGTGTCAGAAAATCTTCAGAAAGATTCCCATTTCTCTTGGTGGAAACGTCCAAATAAAGATCAGTTTACATCCTCATCAGGCATTCTTAGATACTCATTCAAAGAAATTCAAAAGGCAACACTAAATTTCACAACTATCTTGGGACAAGGATCATTTGGCACAGTTCATAAAGCAACAATGGCAACTGGCGAGGTGGTAGCTGTGAAGGTTCTTGGTTCTGATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTACTTTTGCTAGGAAGACTGCATCATCGGAATCTTGTAAATTTGTTAGGATATTGTGTAGATAAAGGACAACGTATCTTGATTTATGAGTTCATGGGCAATGGAAGTCTAGAAAGGCTTATACATGGTGAAGAGAAGGTTTTAAGTTGGGATGAAAGGCTGCAAATTTCTGCTGATATTTCACATGGAATTGAATACCTTCATGAAGGAGCAGTCCCACCCGTCATACACCGTGATTTGAAATCTGCCAATATATTGTTAGATCACTCAATGCGGGCTAAGGTGGCTGATTTTGGGCTTTCGAAGGAGGAAATCTTTGATGGGCGAACTTCTGGCTTGAAAGGTACACATGGCTACATGGACCCGTCATACATTTCCACTAACAAGTTCACAATGAAAAGTGACATTTACAGTCTGGGTATCATCATTTTTGAGCTCATCACTGCCATTCACCCTCAACAGAATTTGATGGAATACATTAACCTTGCTGCAATGGATCATGATGGTGTAGATGGAATAATTGACAAGAAACTGGTGGGAAAATGCAACATTGAAGAAGTGAGGAAGCTTGCTAAGATTGGACACAAGTGCCTGCACAAATCACCAAGGAAGCGTCCTTCAATTGGTGAGGTTTCACAGGCTATATCCAGCATAAGACAGAGACGCCTTTTAAAAGAAAGACCATGTCACTTGCTAGCTCTAGCTTTTCGAGAGCTTTGA 1200 0.4125 MVRQTDLVAFGVSAGLAFGILIACLICLVINWYKKRAHLRRCANERSLTTLPIRTNGLETSTDFSASLSSSIAAPVSENLQKDSHFSWWKRPNKDQFTSSSGILRYSFKEIQKATLNFTTILGQGSFGTVHKATMATGEVVAVKVLGSDSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCVDKGQRILIYEFMGNGSLERLIHGEEKVLSWDERLQISADISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEIFDGRTSGLKGTHGYMDPSYISTNKFTMKSDIYSLGIIIFELITAIHPQQNLMEYINLAAMDHDGVDGIIDKKLVGKCNIEEVRKLAKIGHKCLHKSPRKRPSIGEVSQAISSIRQRRLLKERPCHLLALAFREL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2298g00024 399 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 381 - -
Pral2298g00024 399 Gene3D Transferase(Phosphotransferase) domain 1 192 388 - -
Pral2298g00024 399 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Pral2298g00024 399 FunFam S-receptor-like serine/threonine-protein kinase 87 191 - -
Pral2298g00024 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Pral2298g00024 399 ProSiteProfiles Protein kinase domain profile. 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2298g00024 399 SUPERFAMILY Protein kinase-like (PK-like) 93 373 IPR011009 -
Pral2298g00024 399 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Pral2298g00024 399 CDD STKc_IRAK 122 373 - -
Pral2298g00024 399 Pfam Protein kinase domain 119 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2298g00024 399 Gene3D Phosphorylase Kinase; domain 1 81 191 - -
Pral2298g00024 399 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2298g00024 Pral-Chr2298 392761 397771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2298g00024 107 382 Receptor kinase-like Gene Family AT1G67720 43.599 1.08e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pral2298g00024 Pkinase 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2298g00024 - - pcin:129289449 686.411