Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2295g00008 ATGAAAAGGCCAAGTTCCCGTTCACGTCGCCAGAGTTCCGGCTCCGGCTACAGCACACCCGAACACCGCCATATCTACTCCTCCAGCTATGATTCCTCCAGTGTCACCATCCACAGGTCAAACTCCTCTTGGAACCCAGTCGCGGTTGCGGCCAGATCAGTGGCTGCGGTTTTTGTTGGTTGCTTCACCCCACCGGATGAGAGTAACTCCAGGAGCTTCGTGGATTCTCAGGAGTTCAAAGCTTCCTCTTCATCCTCCGTTGTATCTGATTCTTCGGGAACCGGTAGTCAGAGAACGCATAGTTCAAATAGACGAATCAGTTCCAGTTCATACAAGTCAACTCAGGGAAATGATCCTAGACCTCTGAATTTCACCCTGGAGCGTATCTTCCAAGCCACAAGAAACTTCTCCCCCGCTTACAAGGTCGGTCAAGGTGGTTTTGGTACAGTGTACAAGGCAAATCTCCAGAATGGAACTGTTGTTGCAGTAAAGCGTGCCAAAAAGAGTTTATATGAGAAGCATTCGGGTGTTGAGTTCCAAAGTGAGATCCAAACGTTATCACGGGTTGAACATTTGAATTTGGTCAAGTTCTATGGATATTTAGAGCAAGGAGATGAAAGAATTCTTGTTGTGGAGTATGTCCCAAATGGAACCCTTAGAGAGCATTTAGATTGCATTCGAGGGAACATTTTGGACCTTGCTTCTCGTCTAGACATTGCGATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTCTTACTGAAAACTTGCGAGCGAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCACCTGACAGTGATTCTGGTGCGACCCATGTATCCACCCAAGTTAGAGGAACTGCTGGCTACTTGGATCCTGAATATCTCAGAACCTACCAACTGACTGAGAAGAGTGATGTCTATTCATTTGGCGTTTTACTTGTTGAACTTGTCTCAGGTAGACGTCCCATTGAACCAAAATTTGAACTGAAGGAGAGAATAACTGCAAAATGGGCTATGAAGAAATTCATTGGCGGTGATACCATCTCGGTGTTGGACCCGAAACTAGATCACACTGCCGCAAATAATCTGGCGCTAGAAAAGATACTTGAACTAGCCTTGCAGTGTTTGGCACCTCATAGACAAAACAGGCCTAGTATGAAGAAATGCGCCGAGATCCTTTGGGCCATCCGCAAGGATTACAGAGAGCTATCAGCTTCAGATTTTCGTTCATTTTCCTCTTCTTCCCAGAGGAGTGCATCAATAAAAGAGTGA 1326 0.4532 MKRPSSRSRRQSSGSGYSTPEHRHIYSSSYDSSSVTIHRSNSSWNPVAVAARSVAAVFVGCFTPPDESNSRSFVDSQEFKASSSSSVVSDSSGTGSQRTHSSNRRISSSSYKSTQGNDPRPLNFTLERIFQATRNFSPAYKVGQGGFGTVYKANLQNGTVVAVKRAKKSLYEKHSGVEFQSEIQTLSRVEHLNLVKFYGYLEQGDERILVVEYVPNGTLREHLDCIRGNILDLASRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILLTENLRAKVADFGFARQAPDSDSGATHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVSGRRPIEPKFELKERITAKWAMKKFIGGDTISVLDPKLDHTAANNLALEKILELALQCLAPHRQNRPSMKKCAEILWAIRKDYRELSASDFRSFSSSSQRSASIKE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2295g00008 441 CDD STKc_IRAK 142 411 - -
Pral2295g00008 441 SMART serkin_6 136 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2295g00008 441 SUPERFAMILY Protein kinase-like (PK-like) 116 414 IPR011009 -
Pral2295g00008 441 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Pral2295g00008 441 Gene3D Phosphorylase Kinase; domain 1 95 213 - -
Pral2295g00008 441 Pfam Protein kinase domain 140 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2295g00008 441 MobiDBLite consensus disorder prediction 8 25 - -
Pral2295g00008 441 Gene3D Transferase(Phosphotransferase) domain 1 214 435 - -
Pral2295g00008 441 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 99 213 - -
Pral2295g00008 441 ProSiteProfiles Protein kinase domain profile. 136 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2295g00008 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Pral2295g00008 441 MobiDBLite consensus disorder prediction 84 120 - -
Pral2295g00008 441 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 214 425 - -
Pral2295g00008 441 PANTHER OS01G0750732 PROTEIN 26 435 - -
Pral2295g00008 441 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2295g00008 Pral-Chr2295 40250 43114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2295g00008 124 409 Receptor kinase-like Gene Family AT1G79620 45.172 3.88e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pral2295g00008 Pkinase 3.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2295g00008 - - qsa:O6P43_027253 603.208