Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2287g00007 ATGGATTATGCAGAAGAGAATGGGTTCTGTGTTACTTTTGATGATTTCTGTGATCTTAATGATAATAACAACAACAATGGAGGCAGCATCAGAAGAAGCATGATCAGGAAGAGAAAATATGGTGACAGTATTAATAATGAAGATGAAGAAGAAGAAAATGGAGATGTCAAAATATACAAATCCAAGAACCTCAGGACTGAGAGGAAGAGGAGAGAGAAGCTCAGTAGTAGGCTCTTGATGCTGCGATCTTTAATGACCAGAGCCTGCATAATTGATGATGCCATCACTTACATCAATAAAATGCAAACCCAGGTGGAGAGTCTCACTCAGGAACTTCAAGAAATAGAGGCGAAGGCAAATTCTCAGCTGCCAAAAGCCTTAGATCAGCCGAAGACAAAGAAAAGAGATGAACCAGAGGAGGAAGAAGAAGAGGAGGAGGAGATGAAGAAATGTGGGATTCAGGAACAAGTGAAAGTGGCTGAAATTGAAGTGAATAAGCTGTGGATGAAGATCATCATCGAGAAGAAAAGAGGAAGAATCATGAAACTGATTGAAGCCATGAATTCCTTTGGCATTGGTCTCTTAGACACCAATGTCACCACCACAAAAGGAGCAGTCCTCATCACAACCTCCATTCAGGGGAAGAATGGTGAAAGGCTTGCAGCACAAGAAACCCAGGAGTTGATGCTTGATATTGTTAGAGCTATATAG 711 0.4107 MDYAEENGFCVTFDDFCDLNDNNNNNGGSIRRSMIRKRKYGDSINNEDEEEENGDVKIYKSKNLRTERKRREKLSSRLLMLRSLMTRACIIDDAITYINKMQTQVESLTQELQEIEAKANSQLPKALDQPKTKKRDEPEEEEEEEEEMKKCGIQEQVKVAEIEVNKLWMKIIIEKKRGRIMKLIEAMNSFGIGLLDTNVTTTKGAVLITTSIQGKNGERLAAQETQELMLDIVRAI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2287g00007 236 Coils Coil 91 118 - -
Pral2287g00007 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 119 IPR036638 GO:0046983
Pral2287g00007 236 Gene3D - 57 125 IPR036638 GO:0046983
Pral2287g00007 236 MobiDBLite consensus disorder prediction 119 148 - -
Pral2287g00007 236 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 33 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2287g00007 Pral-Chr2287 49141 50171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2287g00007 27 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 38.073 5.94e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2287g00007 - - pcin:129286892 260.766