Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2283g00003 ATGGAAGAAAGAGCAACCATCTTAGCAGCAATCTCCACCCTCCCTCCTTCCCAACTCTCCCACCTCTCCCTCTCCCTCCTCTCAGCCACTCACCTCCACCGCCTTCGCCTCTCCTCCGTCCTCTCCTCCCCTTCTCTCTTCTCCGCCACCCTCCGCCACCTACACTCTATCTCCCTCCCCGAAAAGTACCTCCTCATCGCTCGCCACCTCCTCTTCTCTCTCCACCGGATCACCACCCACTTCCTCTCCGACCTCACCATCCCATCTCCGCCTTCGCCGCCTATGTCCACCGCCATTCGACAGAGAGACCTGAACGCCGTCCTCCTCCTCCTCTTTTTCTGCGAGACCCACCAACACAACCCCACAGTCCTGGAGGAGAATTATTCGGATTGGAGGCTCAGCTTATGTAATATTTTCTCTGATAAGTTGCTGACAGCTGCTTATTCTCCCGTTGGGGCGAGTACTTGGACGGCTCTGGCTCCTTACGTTGATATGGTGAGTCGGAGCTGGAGACTTGTGAAGATAAGTTGCGGCGGGGGGAAGAAGGGGGCGTCGCCGGAGACGATGGCGGGACTTCCGGGCGTAGAAGTGAAGGAAGGCGGAAGGGAGTGTGTAATATGTAAAGAGGAGATGAAGGTGGGGAAGGACGTGTGCGAATTACCATGCGAGCATGGGTTTCATTGGATGTGTATATTGCCGTGGCTGAAGAACAACGACACGTGTCCTTGCTGTCGCTACCGATTGCCGTCCGATGATGTCTTCGGCGAGATCCAACGGTTAATGGATATGTTGATTAAATTGAGCGGGCGGCAAAGCCTGGTTTAG 825 0.5539 MEERATILAAISTLPPSQLSHLSLSLLSATHLHRLRLSSVLSSPSLFSATLRHLHSISLPEKYLLIARHLLFSLHRITTHFLSDLTIPSPPSPPMSTAIRQRDLNAVLLLLFFCETHQHNPTVLEENYSDWRLSLCNIFSDKLLTAAYSPVGASTWTALAPYVDMVSRSWRLVKISCGGGKKGASPETMAGLPGVEVKEGGRECVICKEEMKVGKDVCELPCEHGFHWMCILPWLKNNDTCPCCRYRLPSDDVFGEIQRLMDMLIKLSGRQSLV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2283g00003 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 142 249 - -
Pral2283g00003 274 ProSiteProfiles Zinc finger RING-type profile. 204 245 IPR001841 -
Pral2283g00003 274 Pfam Ring finger domain 203 245 IPR001841 -
Pral2283g00003 274 SMART ring_2 204 244 IPR001841 -
Pral2283g00003 274 SUPERFAMILY RING/U-box 199 250 - -
Pral2283g00003 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 251 IPR013083 -
Pral2283g00003 274 CDD RING-H2_PA-TM-RING 203 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2283g00003 Pral-Chr2283 10818 11677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2283g00003 2 268 C3H Transcription Factor Family AT5G02750 43.056 2.96e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2283g00003 K11982 - pcin:129304395 404.06