Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2280g00004 ATGCAACACAAGGACATCGTGGACATATTACTCTCTTGCTTGAAGGATTCTCATGACGATGAACAAAATCCAGTCAAAGATCGAACCAATATCAAGGCCATACTTTTGGACTTGCTTTCTGGTGCAATAGACACTTCCGTCACTGTTAGTCTCTGGGTTTTCTCAGAACTCTTGAAGAATCCCAGAGTAATGAAAAAACTCCAACATGAGCTGGAAAACCTTGTAGGAAAAAGCAATTTGGTCGAGGAGGTTGATTTGCCGAGGTTGACTTACTTGGACATGGTGGTCAAAGAGACTTTGAGACTACATCCTGTTGCGCCATTGCTGCTCCCTCGAGTCAGCACCAAGGATATAACTATCAATGGATATTATATAAGGAACAAGTCACGAGTGATTGTGAATGTGTGGGCAATAGGACGGGATCCTAAGATATGGTCAGATAATGCGGAAGCATTTTATCCAGAGAGGTTCCTGAATAGCAATGTAGATCTCCGAGGAAAAGACTTCCAACTGATACCATTTGGTTCAGGTCGAAGAGGATGCCCTGGCATGCAGTTAGGGTTAATTACTGTTAAGCTGGTTATAGCACAATTAATGCATTGCTTTAATTGGGAACTTCCACAAGGCGTTTCTCCTGATGAAGTGGATATGACTGAGAAATTTGGACTATTGATTCCAAGAGCTAATCACTTAGTAGCTCTTCCATCATATTGCCTAGCAGAGTGA 726 0.4215 MQHKDIVDILLSCLKDSHDDEQNPVKDRTNIKAILLDLLSGAIDTSVTVSLWVFSELLKNPRVMKKLQHELENLVGKSNLVEEVDLPRLTYLDMVVKETLRLHPVAPLLLPRVSTKDITINGYYIRNKSRVIVNVWAIGRDPKIWSDNAEAFYPERFLNSNVDLRGKDFQLIPFGSGRRGCPGMQLGLITVKLVIAQLMHCFNWELPQGVSPDEVDMTEKFGLLIPRANHLVALPSYCLAE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2280g00004 241 SUPERFAMILY Cytochrome P450 3 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS E-class P450 group I signature 181 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS E-class P450 group I signature 30 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS E-class P450 group I signature 171 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS E-class P450 group I signature 50 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS E-class P450 group I signature 93 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS P450 superfamily signature 181 192 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS P450 superfamily signature 172 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS P450 superfamily signature 94 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PRINTS P450 superfamily signature 41 58 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 FunFam Predicted protein 39 233 - -
Pral2280g00004 241 Gene3D Cytochrome P450 1 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 174 183 IPR017972 GO:0005506|GO:0016705
Pral2280g00004 241 Pfam Cytochrome P450 4 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00004 241 PANTHER CYTOCHROME P450 93A3-LIKE 2 239 - -
Pral2280g00004 241 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2280g00004 Pral-Chr2280 65237 65971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2280g00004 20 236 Monolignol Biosynthesis Gene Families AT4G36220 48.402 3.63e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2280g00004 - - qsa:O6P43_007987 335.109