Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2280g00003 ATGCTTTCCTTGATACGTCAACCTACGGATTTGTATGACGACCAAAACAATGTTATTGATAGAGACCACCTCAAGGCTATTTTAGCATATATGATTTTTGCCGCAACTGACGCTTCTGTCATTGTGGTTGACTGCGCTCTATCTGAACTCTTGAGGCATCCAAGAGTGATTAAAAATCTCCAAAATGAGCTACAAAATGTGGTTGGAATGAACAGAATGGTGGATGAGGCTGATTTAGCAGAGTTAAGTTACTCATATATGGTCATTAAGGAGACTCTTAGATTACATCCACCTGCTCCTTTACTTATCCCTCGAGAAAGTATGAAGGATGTCACAGTTAATGGATATTGCATAAGAAAAAAGTCCAGGATCATGATGAATGCATGGGCTATCGGACGAGATCCTAAGTTATGGTCCGATGATGCTTATATGTTCTATCCAGAAAGGTTCGTTGATAACAATATAGATATTCATGGGCATAATTATCAATTTTTACCATTTGGTTCAGGTCGTAGAAGATGTCCTGGACTTCAAATGGGTATGACCACAGTTAAGTTAGTTGTAGCTCAATTGGTGCATTGCTTTAGTTGGGAGCTTCCTTGTGGCGTGTGTCCAAGTGACTTGGATATGAATGAAAAGTTTGGCCTCACAGTCCGAAGAACGAAGCATTTGCAGGTTGTTCCAACTTGTAGATTACATACGGACTATTCAAACTGA 717 0.3975 MLSLIRQPTDLYDDQNNVIDRDHLKAILAYMIFAATDASVIVVDCALSELLRHPRVIKNLQNELQNVVGMNRMVDEADLAELSYSYMVIKETLRLHPPAPLLIPRESMKDVTVNGYCIRKKSRIMMNAWAIGRDPKLWSDDAYMFYPERFVDNNIDIHGHNYQFLPFGSGRRRCPGLQMGMTTVKLVVAQLVHCFSWELPCGVCPSDLDMNEKFGLTVRRTKHLQVVPTCRLHTDYSN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2280g00003 238 PRINTS P450 superfamily signature 52 65 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PRINTS P450 superfamily signature 165 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PRINTS P450 superfamily signature 174 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PRINTS E-class P450 group I signature 164 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PRINTS E-class P450 group I signature 43 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PRINTS E-class P450 group I signature 23 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PRINTS E-class P450 group I signature 174 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PRINTS E-class P450 group I signature 86 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 167 176 IPR017972 GO:0005506|GO:0016705
Pral2280g00003 238 Gene3D Cytochrome P450 2 236 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 PANTHER CYTOCHROME P450 93A3-LIKE 15 233 - -
Pral2280g00003 238 FunFam Predicted protein 32 226 - -
Pral2280g00003 238 Pfam Cytochrome P450 16 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00003 238 SUPERFAMILY Cytochrome P450 10 231 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2280g00003 Pral-Chr2280 62206 62922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2280g00003 4 232 Monolignol Biosynthesis Gene Families AT4G36220 46.753 4.92e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2280g00003 - - pcin:129301104 350.517